SLC7A6

General Information

Gene Name : SLC7A6
Gene ID : ENSG00000103064.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC7A6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC7A6	ENSG00000103064.14	41.97	40.90	41.44	ENCSR000AEF
HepG2	SLC7A6	ENSG00000103064.14	46.72	42.86	44.79	ENCSR985KAT
K562	SLC7A6	ENSG00000103064.14	37.48	35.82	36.65	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLC7A6 is not avaliable on ENCORE database.

Proteins bound to RNA

SLC7A6 RNA is bound by 33 proteins.

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eCLIP assay for SLC7A6 is not avaliable on ENCORE database.

33 proteins are bound to SLC7A6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	68324177	68324305	+	CDS,intron-Distal,intron-Proximal	4.77614	36.11625	K562	PTBP1
chr16	68321544	68321647	+	intron-Distal,intron-Proximal	4.96475	29.80159	HepG2	SF3A3
chr16	68324168	68324233	+	intron-Distal,intron-Proximal	4.40477	29.40232	HepG2	PTBP1
chr16	68324257	68324345	+	CDS,intron-Distal,intron-Proximal	4.22178	29.32031	HepG2	U2AF2
chr16	68333907	68333938	+	3'-UTR	4.43242	19.12941	HepG2	LIN28B
chr16	68324233	68324301	+	CDS,intron-Distal,intron-Proximal	4.14376	18.97939	HepG2	PTBP1
chr16	68324169	68324221	+	intron-Distal,intron-Proximal	4.47922	18.22183	HepG2	U2AF2
chr16	68299072	68299156	+	intron-Distal	4.95605	14.96125	HepG2	HNRNPM
chr16	68308729	68308844	+	CDS,intron-Proximal	3.05155	14.67592	HepG2	PPIG
chr16	68324221	68324257	+	intron-Distal,intron-Proximal	4.13395	13.74897	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 79 entries

eCLIP assay for SLC7A6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SLC7A6 is not available on ENCORE database.
121 RBPs can affect the levels of SLC7A6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SLC7A6 is not available on ENCORE database.

121 RBPs can affect the gene expression of SLC7A6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC7A6	ENSG00000103064.9	1290.99450	3047.39420	-1.23910	74.82310	72.09090	HepG2	DAZAP1
SLC7A6	ENSG00000103064.9	4116.08620	1882.41780	1.12860	62.69540	60.43850	HepG2	UTP3
SLC7A6	ENSG00000103064.9	2874.58290	1368.04130	1.07110	50.20640	48.43220	HepG2	SRSF9
SLC7A6	ENSG00000103064.9	1178.98650	2884.62220	-1.29080	37.24400	35.36810	HepG2	PUF60
SLC7A6	ENSG00000103064.9	2937.39040	1511.48820	0.95850	31.12420	29.50980	HepG2	TAF15
SLC7A6	ENSG00000103064.9	1187.58890	2237.31360	-0.91370	29.82830	28.21470	HepG2	DKC1
SLC7A6	ENSG00000103064.9	1068.58890	2105.38850	-0.97840	27.50100	25.77110	HepG2	SAFB2
SLC7A6	ENSG00000103064.9	3464.61130	1546.55640	1.16350	27.48100	25.51750	HepG2	HNRNPK
SLC7A6	ENSG00000103064.9	3228.48460	1949.75540	0.72750	26.34070	24.63650	HepG2	UPF1
SLC7A6	ENSG00000103064.9	3743.11690	1785.37850	1.06790	25.65790	24.14110	HepG2	BOP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 148 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SLC7A6 is not available on ENCORE database.

25 RBPs can affect the splicing of SLC7A6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SLC7A6	ENSG00000103064.9	chr16	+	68307720	68307807			68300495	68300624	68308593	68309152	-0.21800	0.00000	0.00001	excluded	K562	EFTUD2
SE	SLC7A6	ENSG00000103064.9	chr16	+	68307720	68307807			68300495	68300624	68308593	68308779	0.29700	0.00000	0.00006	included	HepG2	XRCC6
MXE	SLC7A6	ENSG00000103064.9	chr16	+	68324298	68324443	68325111	68325235	68321648	68321774	68325460	68325564	-0.19400	0.00000	0.00000	2included	HepG2	U2AF2
MXE	SLC7A6	ENSG00000103064.9	chr16	+	68321648	68321774	68324298	68324443	68308593	68309152	68325111	68325235	-0.32100	0.00000	0.00002	2included	K562	PRPF8
SE	SLC7A6	ENSG00000103064.9	chr16	+	68321225	68321338			68308593	68309152	68321648	68321774	0.27400	0.00001	0.01449	included	HepG2	LARP7
SE	SLC7A6	ENSG00000103064.9	chr16	+	68307720	68307807			68300495	68300624	68308593	68308779	0.26700	0.00001	0.00080	included	HepG2	HNRNPC
MXE	SLC7A6	ENSG00000103064.9	chr16	+	68300495	68300624	68308593	68309152	68298462	68298479	68321648	68321774	0.30000	0.00001	0.00063	1included	HepG2	SUPV3L1
SE	SLC7A6	ENSG00000103064.9	chr16	+	68307720	68307807			68300495	68300624	68308593	68308779	0.24900	0.00002	0.00417	included	HepG2	SUPV3L1
A3SS	SLC7A6	ENSG00000103064.9	chr16	+	68325435	68325564			68325460	68325564	68325111	68325235	0.08600	0.00002	0.00019	longer	K562	AQR
SE	SLC7A6	ENSG00000103064.9	chr16	+	68300495	68300624			68298432	68298479	68308593	68308851	-0.25800	0.00003	0.00114	excluded	K562	SF3B4

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC7A6

General Information

Functions

Localization

Domains (AlphaFold: SLC7A6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC7A6 is not avaliable on ENCORE database.

33 proteins are bound to SLC7A6 RNA:

eCLIP assay for SLC7A6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC7A6 is not available on ENCORE database.

121 RBPs can affect the gene expression of SLC7A6 :

The Knockdown/knockout RNA-Seq assay for SLC7A6 is not available on ENCORE database.

25 RBPs can affect the splicing of SLC7A6 :

The Knockdown/knockout RNA-Seq assay for SLC7A6 is not avaliable on ENCORE database.