SLC35D1

General Information

Gene Name       : SLC35D1
Gene ID             : ENSG00000116704.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC35D1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC35D1ENSG00000116704.76.846.306.57ENCSR000AEF
HepG2SLC35D1ENSG00000116704.711.9919.3215.66ENCSR985KAT
K562SLC35D1ENSG00000116704.74.884.534.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC35D1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC35D1 RNA is bound by 16 proteins.  







eCLIP assay for SLC35D1 is not avaliable on ENCORE database.





16 proteins are bound to SLC35D1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16746875967468821-3'-UTR,intron-Distal4.595205.14974HepG2UPF1
chr16746830767468364-3'-UTR,intron-Distal4.767535.94150HepG2UPF1
chr16747357367473644-3'-UTR,intron-Distal4.656045.54528HepG2QKI
chr16746831667468370-3'-UTR,intron-Distal4.253803.34655HepG2AKAP1
chr16746767667467751-3'-UTR,intron-Distal3.430096.58529HepG2UPF1
chr16746879967468889-3'-UTR,intron-Distal3.021414.25236HepG2HNRNPM
chr16746920767469322-3'-UTR,intron-Distal5.4213920.69485HepG2UPF1
chr16746892867468971-3'-UTR,intron-Distal3.171203.05408HepG2UPF1
chr16751863467518671-5'-UTR,CDS,intron-Distal,intron-Proximal4.258643.49905HepG2PPIG
chr16751863467518690-5'-UTR,CDS,intron-Distal,intron-Proximal4.497276.77181K562U2AF2
chr16751968767519777-5'-UTR,CDS,intron-Distal5.9632539.38923HepG2DDX3X
chr16751863367518693-5'-UTR,CDS,intron-Distal,intron-Proximal5.2880810.75098HepG2U2AF2
chr16751970067519778-5'-UTR,intron-Distal3.542894.27210HepG2NCBP2
chr16751852467518598-CDS,intron-Distal,intron-Proximal4.624755.68078HepG2AQR
chr16751948167519501-CDS,intron-Distal4.3769624.88612HepG2PRPF8
chr16751945267519499-CDS,intron-Distal3.523696.99200HepG2EFTUD2
chr16751848967518552-CDS,intron-Distal,intron-Proximal4.551124.67689HepG2PPIG
chr16751946567519564-CDS,intron-Distal4.002193.73331K562RBM15
chr16751296967513053-CDS,intron-Distal,intron-Proximal3.149385.00751HepG2BCLAF1
chr16751850867518601-CDS,intron-Distal,intron-Proximal5.060865.17615K562AQR
chr16751610867516172-CDS,intron-Distal,intron-Proximal4.686455.87377HepG2PPIG
chr16751297067513065-CDS,intron-Distal,intron-Proximal3.775873.00996K562BUD13
chr16747011767470186-CDS,intron-Distal3.993204.69223K562SF3B4
chr16751957267519644-CDS,intron-Distal4.305716.96497HepG2DDX3X
chr16751769867517761-CDS,intron-Distal3.406383.68471HepG2BCLAF1
chr16751851767518589-CDS,intron-Distal,intron-Proximal5.104396.40247K562SF3B4
chr16751944567519481-intron-Distal4.3377728.65247HepG2PRPF8
chr16751944967519482-intron-Distal4.388896.99120K562AQR
chr16751940967519452-intron-Distal4.995406.80961HepG2EFTUD2
chr16750781867507917-intron-Distal,intron-Proximal4.067874.31512K562KHSRP
chr16751932367519356-intron-Distal5.564155.24235HepG2EFTUD2
chr16751948267519493-intron-Distal3.181374.38107K562AQR
chr16750802067508086-intron-Distal,intron-Proximal3.195493.78824HepG2KHSRP
chr16751941967519439-intron-Distal4.607705.27173HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC35D1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC35D1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of SLC35D1.  








The Knockdown/knockout RNA-Seq assay for SLC35D1 is not available on ENCORE database.





99 RBPs can affect the gene expression of SLC35D1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC35D1ENSG00000116704.6782.997401270.92900-0.698804.519502.39070HepG2AARS
SLC35D1ENSG00000116704.61668.576001203.365400.471404.011802.89050HepG2ABCF1
SLC35D1ENSG00000116704.6996.224701237.42580-0.312803.761003.07270HepG2ACO1
SLC35D1ENSG00000116704.61115.257101772.58380-0.668505.072504.37930HepG2AKAP1
SLC35D1ENSG00000116704.6626.62220927.06540-0.565104.085902.82610HepG2AKAP8
SLC35D1ENSG00000116704.61259.537701879.72110-0.577604.421803.59000HepG2AUH
SLC35D1ENSG00000116704.6697.607301296.68130-0.894307.026005.49430HepG2BCCIP
SLC35D1ENSG00000116704.61441.749101126.824400.355502.710401.81930HepG2BCLAF1
SLC35D1ENSG00000116704.63252.372901393.470201.2227026.8644024.80940HepG2CIRBP
SLC35D1ENSG00000116704.6544.50580897.26160-0.720604.459003.48430HepG2CNOT7
SLC35D1ENSG00000116704.6959.930301373.38390-0.516708.194307.19910HepG2CELF1
SLC35D1ENSG00000116704.61534.213901107.348900.470304.794303.92820HepG2DDX21
SLC35D1ENSG00000116704.61415.469701083.562400.385403.717402.64790HepG2DDX24
SLC35D1ENSG00000116704.6510.685101192.98230-1.2241013.4429010.93030HepG2DDX27
SLC35D1ENSG00000116704.6936.077601274.85000-0.445602.495801.75670HepG2DDX55
SLC35D1ENSG00000116704.6603.192801096.86880-0.8627011.406909.51750HepG2DDX5
SLC35D1ENSG00000116704.6746.098601458.42250-0.967008.367907.34810HepG2DDX6
SLC35D1ENSG00000116704.62069.073801183.852700.8054022.8187021.32980HepG2DKC1
SLC35D1ENSG00000116704.61204.83840953.407500.337602.231101.40140HepG2EEF2
SLC35D1ENSG00000116704.6817.696001402.32260-0.778206.763105.86340HepG2EIF2S1
SLC35D1ENSG00000116704.6991.56110773.958200.357302.142401.33760HepG2EIF3D
SLC35D1ENSG00000116704.61469.026101045.669800.490305.823404.34080HepG2EIF3G
SLC35D1ENSG00000116704.62287.526101549.879100.561505.130904.26180HepG2EIF4A3
SLC35D1ENSG00000116704.6946.085001508.74270-0.673305.116504.19990HepG2EIF4B
SLC35D1ENSG00000116704.61765.874001456.901900.277402.900802.04760HepG2EIF4G1
SLC35D1ENSG00000116704.61769.890501395.646200.342602.560101.77460HepG2EIF4G2
SLC35D1ENSG00000116704.61361.643101042.580200.385103.289802.10310HepG2ESF1
SLC35D1ENSG00000116704.61142.365702157.98100-0.917709.476008.47250HepG2ETF1
SLC35D1ENSG00000116704.6418.66250691.71890-0.724408.557606.48690HepG2FAM120A
SLC35D1ENSG00000116704.6806.899201055.23070-0.387103.232302.00650HepG2FASTKD2
SLC35D1ENSG00000116704.6564.82890709.47720-0.328902.045701.36160HepG2FUBP3
SLC35D1ENSG00000116704.6929.534501319.91540-0.505903.091801.91050HepG2FUS
SLC35D1ENSG00000116704.61060.292001450.43990-0.452003.026902.33230HepG2G3BP1
SLC35D1ENSG00000116704.62079.836401539.520400.433903.855902.79390HepG2G3BP2
SLC35D1ENSG00000116704.61045.80790689.110900.601705.716704.42650HepG2GEMIN5
SLC35D1ENSG00000116704.61500.536301168.731700.360402.371801.77540HepG2GPKOW
SLC35D1ENSG00000116704.6651.833801243.78010-0.932207.927405.47440HepG2GTF2F1
SLC35D1ENSG00000116704.61853.15990934.183300.9881018.1697016.75110HepG2HNRNPA1
SLC35D1ENSG00000116704.61384.366901039.094000.413803.645502.85810HepG2HNRNPC
SLC35D1ENSG00000116704.6958.189501345.39870-0.489709.597908.41550HepG2HNRNPL
SLC35D1ENSG00000116704.61785.393601115.338600.678708.245407.22100HepG2HNRNPLL
SLC35D1ENSG00000116704.61803.277801474.424200.290401.946801.37120HepG2IGF2BP2
SLC35D1ENSG00000116704.6613.940201054.38580-0.7802018.6238016.91370HepG2ILF2
SLC35D1ENSG00000116704.62409.663801563.859500.623607.005305.97700HepG2MAGOH
SLC35D1ENSG00000116704.62216.318901572.685000.494803.264102.58340HepG2MATR3
SLC35D1ENSG00000116704.6853.967901464.48370-0.7781015.3509013.62660HepG2NOL12
SLC35D1ENSG00000116704.61310.27750988.932300.405803.282102.46850HepG2NSUN2
SLC35D1ENSG00000116704.6586.65630819.96730-0.483102.102001.34410HepG2PABPC1
SLC35D1ENSG00000116704.6692.811901021.74130-0.560508.029306.70680HepG2PARN
SLC35D1ENSG00000116704.61953.961601249.509200.644904.659203.34010HepG2PCBP2
SLC35D1ENSG00000116704.6939.003701483.90520-0.6602017.6106016.38160HepG2PUM1
SLC35D1ENSG00000116704.61261.144901482.85720-0.233601.977501.40450HepG2PUM2
SLC35D1ENSG00000116704.61727.148901260.382300.454408.576907.59320HepG2PUS1
SLC35D1ENSG00000116704.6956.710001622.99140-0.7625014.7645013.48390HepG2QKI
SLC35D1ENSG00000116704.6795.202101305.21620-0.7149011.344909.78920HepG2RBM15
SLC35D1ENSG00000116704.6955.720001803.71250-0.916309.127808.31130HepG2RBM22
SLC35D1ENSG00000116704.62165.996801472.977800.556207.961206.86880HepG2RBM25
SLC35D1ENSG00000116704.6562.62770866.46770-0.623004.039502.20140HepG2RBM47
SLC35D1ENSG00000116704.61692.991301039.090400.704207.908306.13800HepG2RCC2
SLC35D1ENSG00000116704.61553.360701213.361100.356302.773802.09040HepG2RPLP0
SLC35D1ENSG00000116704.6774.758601204.65550-0.636806.459204.82440HepG2RPS5
SLC35D1ENSG00000116704.61410.600501103.987700.353502.773402.06560HepG2SF3B1
SLC35D1ENSG00000116704.61556.743101340.277200.215902.211801.57330HepG2SLBP
SLC35D1ENSG00000116704.6836.122601072.01200-0.358504.830404.01860HepG2SMN1
SLC35D1ENSG00000116704.6676.940101229.25870-0.860708.009406.33810HepG2SMNDC1
SLC35D1ENSG00000116704.61363.118802037.29700-0.579704.461403.86900HepG2SRFBP1
SLC35D1ENSG00000116704.6733.410801214.33430-0.727506.601104.27110HepG2SRP68
SLC35D1ENSG00000116704.63375.406101628.530001.0514049.2512047.79810HepG2SRSF1
SLC35D1ENSG00000116704.61188.801701380.18170-0.215402.188201.62410HepG2SRSF5
SLC35D1ENSG00000116704.61154.850601324.90280-0.198201.817701.35300HepG2SRSF9
SLC35D1ENSG00000116704.63826.583801768.978601.1130050.9929049.46630HepG2SSB
SLC35D1ENSG00000116704.6351.57910811.85630-1.2074012.5471010.16900HepG2STAU1
SLC35D1ENSG00000116704.61386.680701569.70600-0.178901.966001.42460HepG2SUCLG1
SLC35D1ENSG00000116704.61199.361801463.80850-0.287502.925502.35070HepG2TAF15
SLC35D1ENSG00000116704.61628.556701003.045100.6991012.3175011.39390HepG2TIAL1
SLC35D1ENSG00000116704.6547.215301011.96270-0.8870019.3635018.04320HepG2TRIM56
SLC35D1ENSG00000116704.61314.309901039.622000.338102.424801.83320HepG2U2AF1
SLC35D1ENSG00000116704.61087.630801445.42830-0.410302.973502.10800HepG2UBE2L3
SLC35D1ENSG00000116704.6391.07070749.80720-0.9391010.049908.60570HepG2UCHL5
SLC35D1ENSG00000116704.61138.086201413.55100-0.312703.419302.26850HepG2UTP18
SLC35D1ENSG00000116704.6944.854001326.07320-0.489002.925901.83520HepG2XRCC6
SLC35D1ENSG00000116704.6539.46120705.63630-0.387402.462101.90210K562AQR
SLC35D1ENSG00000116704.6253.31040347.06710-0.454302.948001.57820K562DDX27
SLC35D1ENSG00000116704.6886.72200566.124400.647309.718708.58600K562DDX47
SLC35D1ENSG00000116704.6696.63760467.051800.576706.542005.50490K562EIF2S2
SLC35D1ENSG00000116704.6881.90680374.616001.2351010.344608.17040K562EIF3D
SLC35D1ENSG00000116704.6568.72290419.280300.439703.100102.25940K562EIF3G
SLC35D1ENSG00000116704.6387.10830278.991400.472402.373301.34030K562FKBP4
SLC35D1ENSG00000116704.6507.38930376.480500.430402.420101.61780K562FMR1
SLC35D1ENSG00000116704.6729.33130461.387500.660504.540203.58560K562G3BP2
SLC35D1ENSG00000116704.6543.40000321.403300.757506.943706.03830K562HNRNPC
SLC35D1ENSG00000116704.6237.12200344.85830-0.540402.997102.08350K562METAP2
SLC35D1ENSG00000116704.6605.21040393.760600.620004.313003.27360K562PCBP3
SLC35D1ENSG00000116704.6424.29180302.027600.490303.311402.43010K562POLR2G
SLC35D1ENSG00000116704.6363.22900533.39850-0.554304.075203.05550K562PPIG
SLC35D1ENSG00000116704.6481.09650340.414700.498902.975602.19870K562PRPF8
SLC35D1ENSG00000116704.6709.70250580.286300.290301.895101.32650K562PTBP1
SLC35D1ENSG00000116704.6411.76040556.56550-0.434702.863602.00540K562RBM22
SLC35D1ENSG00000116704.6489.87710346.796700.498202.870602.03700K562RPS19
SLC35D1ENSG00000116704.6365.04620269.114700.439802.291801.31250K562SAFB
SLC35D1ENSG00000116704.6393.90920278.233000.501502.829201.36890K562SDAD1
SLC35D1ENSG00000116704.6330.98290460.65330-0.476903.366702.47130K562SF3A3
SLC35D1ENSG00000116704.6336.88270479.73990-0.510003.917002.89420K562SF3B4
SLC35D1ENSG00000116704.6576.76890432.481800.415302.889301.57910K562SSB
SLC35D1ENSG00000116704.6355.90290563.97400-0.664105.095803.32000K562STAU1
SLC35D1ENSG00000116704.6462.54740302.941900.610504.938503.83460K562SYNCRIP
SLC35D1ENSG00000116704.6648.72810494.928700.390303.509102.70650K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC35D1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC35D1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC35D1 is not avaliable on ENCORE database.