SETD5

General Information

Gene Name : SETD5
Gene ID : ENSG00000168137.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SETD5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SETD5	ENSG00000168137.15	59.55	59.63	59.59	ENCSR000AEF
HepG2	SETD5	ENSG00000168137.15	46.07	52.97	49.52	ENCSR985KAT
K562	SETD5	ENSG00000168137.15	77.87	85.86	81.87	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SETD5 is not avaliable on ENCORE database.

Proteins bound to RNA

SETD5 RNA is bound by 79 proteins.

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eCLIP assay for SETD5 is not avaliable on ENCORE database.

79 proteins are bound to SETD5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	9472283	9472334	+	intron-Distal	4.62406	61.97021	K562	QKI
chr3	9516723	9516753	+	3'-UTR,CDS,intron-Proximal	5.35564	48.34636	K562	SF3B4
chr3	9472335	9472399	+	intron-Distal	5.07018	47.80090	K562	QKI
chr3	9482164	9482309	+	3'-UTR,CDS	3.15789	46.47566	K562	ZNF622
chr3	9516753	9516789	+	3'-UTR,CDS	4.94725	44.86944	K562	SF3B4
chr3	9519516	9519589	+	3'-UTR,intron-Distal	3.87057	43.37388	K562	PUM2
chr3	9516271	9516334	+	intron-Proximal	5.07198	43.34944	K562	AQR
chr3	9482157	9482301	+	3'-UTR,CDS	3.57510	42.97695	K562	UCHL5
chr3	9516738	9516796	+	3'-UTR,CDS,intron-Proximal	4.55215	38.91714	HepG2	U2AF2
chr3	9516740	9516802	+	3'-UTR,CDS,intron-Proximal	6.03660	37.39523	K562	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 565 entries

eCLIP assay for SETD5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SETD5 is not available on ENCORE database.
93 RBPs can affect the levels of SETD5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SETD5 is not available on ENCORE database.

93 RBPs can affect the gene expression of SETD5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SETD5	ENSG00000168137.11	2256.11060	3542.46070	-0.65090	19.78720	18.35970	HepG2	DKC1
SETD5	ENSG00000168137.11	2215.68140	4109.33850	-0.89120	18.66960	17.30290	HepG2	PUF60
SETD5	ENSG00000168137.11	3050.53700	4362.39110	-0.51610	17.90570	16.66540	HepG2	PUM1
SETD5	ENSG00000168137.11	2680.37200	4057.54920	-0.59820	17.34150	15.96690	HepG2	SRSF5
SETD5	ENSG00000168137.11	3506.70930	4999.66640	-0.51170	15.68390	14.66730	HepG2	SSB
SETD5	ENSG00000168137.11	4758.31570	3159.72810	0.59060	14.83020	13.68530	HepG2	TAF15
SETD5	ENSG00000168137.11	2652.20280	3639.51310	-0.45660	14.82890	13.52360	HepG2	SMN1
SETD5	ENSG00000168137.11	5335.72500	3503.25800	0.60690	14.51170	13.23790	HepG2	QKI
SETD5	ENSG00000168137.11	3859.04840	2332.84210	0.72610	13.55300	11.87000	HepG2	FUBP3
SETD5	ENSG00000168137.11	13168.50610	8125.84920	0.69640	12.88630	11.75330	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SETD5 is not available on ENCORE database.

69 RBPs can affect the splicing of SETD5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SETD5	ENSG00000168137.11	chr3	+	9494571	9494635	9490071	9490314	9495422	9495552	0.06400	0.00000	included	K562	SRSF1
SE	SETD5	ENSG00000168137.11	chr3	+	9476507	9476566	9475960	9476169	9477411	9477590	-0.31600	0.00000	excluded	K562	SF3B4
SE	SETD5	ENSG00000168137.11	chr3	+	9478533	9478572	9477411	9477590	9482139	9482382	0.23400	0.00000	included	HepG2	RBM22
SE	SETD5	ENSG00000168137.11	chr3	+	9494571	9494635	9490071	9490314	9495422	9495552	0.12300	0.00000	included	HepG2	RBM22
SE	SETD5	ENSG00000168137.11	chr3	+	9478533	9478572	9477411	9477590	9482139	9482382	0.46900	0.00000	included	K562	MATR3
SE	SETD5	ENSG00000168137.11	chr3	+	9475728	9475865	9475528	9475634	9475960	9476169	0.31800	0.00000	included	K562	AKAP8L
SE	SETD5	ENSG00000168137.11	chr3	+	9510202	9510259	9506108	9506356	9512142	9512613	0.42300	0.00000	included	HepG2	HNRNPM
SE	SETD5	ENSG00000168137.11	chr3	+	9510202	9510259	9506108	9506356	9512142	9512613	0.19600	0.00000	included	K562	XRCC6
SE	SETD5	ENSG00000168137.11	chr3	+	9495688	9495785	9495422	9495552	9506108	9506638	0.18200	0.00000	included	K562	XRCC6
SE	SETD5	ENSG00000168137.11	chr3	+	9495688	9495785	9495422	9495552	9506108	9506638	0.11000	0.00117	included	K562	PUM1

Showing 1 to 10 of 219 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SETD5

General Information

Functions

Localization

Domains (AlphaFold: SETD5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SETD5 is not avaliable on ENCORE database.

79 proteins are bound to SETD5 RNA:

eCLIP assay for SETD5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SETD5 is not available on ENCORE database.

93 RBPs can affect the gene expression of SETD5 :

The Knockdown/knockout RNA-Seq assay for SETD5 is not available on ENCORE database.

69 RBPs can affect the splicing of SETD5 :

The Knockdown/knockout RNA-Seq assay for SETD5 is not avaliable on ENCORE database.