SBNO2

General Information

Gene Name : SBNO2
Gene ID : ENSG00000064932.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SBNO2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SBNO2	ENSG00000064932.15	1.38	3.39	2.38	ENCSR000AEF
HepG2	SBNO2	ENSG00000064932.15	14.13	2.64	8.38	ENCSR985KAT
K562	SBNO2	ENSG00000064932.15	9.36	3.53	6.44	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SBNO2 is not avaliable on ENCORE database.

Proteins bound to RNA

SBNO2 RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for SBNO2 is not avaliable on ENCORE database.

45 proteins are bound to SBNO2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	1165945	1166045	-	intron-Distal	7.10608	44.45761	K562	AATF
chr19	1173202	1173317	-	intron-Distal	5.13399	32.45337	HepG2	CSTF2T
chr19	1172200	1172300	-	intron-Distal	4.98541	32.45337	HepG2	CSTF2T
chr19	1172674	1172757	-	intron-Distal	5.79932	31.69354	HepG2	CSTF2T
chr19	1170518	1170628	-	intron-Distal	6.33837	31.58176	K562	EIF4G2
chr19	1169427	1169527	-	intron-Distal	5.29150	28.77258	HepG2	CSTF2T
chr19	1158165	1158270	-	intron-Distal	5.58933	27.29416	HepG2	CSTF2T
chr19	1165581	1165688	-	intron-Distal	5.38403	25.97570	HepG2	FAM120A
chr19	1167472	1167540	-	intron-Distal	4.65777	25.65152	HepG2	CSTF2T
chr19	1163964	1164040	-	intron-Distal	6.43245	25.17216	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 488 entries

eCLIP assay for SBNO2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SBNO2 is not available on ENCORE database.
92 RBPs can affect the levels of SBNO2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SBNO2 is not available on ENCORE database.

92 RBPs can affect the gene expression of SBNO2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SBNO2	ENSG00000064932.11	745.16880	282.65950	1.39840	25.44200	22.76120	K562	TIA1
SBNO2	ENSG00000064932.11	699.67900	308.08640	1.18330	23.52500	21.95150	HepG2	SRSF5
SBNO2	ENSG00000064932.11	529.24810	202.22770	1.38790	22.76460	21.34920	HepG2	TRIM56
SBNO2	ENSG00000064932.11	690.45170	331.23150	1.05960	22.26600	20.91520	HepG2	PUM1
SBNO2	ENSG00000064932.11	1860.26890	1009.28110	0.88210	18.06080	16.73360	K562	AGGF1
SBNO2	ENSG00000064932.11	644.28980	289.57440	1.15370	16.45740	14.74070	K562	SRSF1
SBNO2	ENSG00000064932.11	472.75140	183.68300	1.36380	14.81010	13.49850	HepG2	SAFB2
SBNO2	ENSG00000064932.11	577.54150	299.20440	0.94870	13.46910	12.12020	HepG2	SLBP
SBNO2	ENSG00000064932.11	20.54160	124.21720	-2.59620	13.86360	12.01730	K562	G3BP2
SBNO2	ENSG00000064932.11	583.28180	295.35810	0.98160	12.89590	11.51780	K562	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 105 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SBNO2 is not available on ENCORE database.

1 RBPs can affect the splicing of SBNO2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	SBNO2	ENSG00000064932.11	chr19	-	1110733	1110936			1110733	1110887	1111017	1111092	0.23100	0.00000	0.00000	longer	K562	AQR

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SBNO2

General Information

Functions

Localization

Domains (AlphaFold: SBNO2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SBNO2 is not avaliable on ENCORE database.

45 proteins are bound to SBNO2 RNA:

eCLIP assay for SBNO2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SBNO2 is not available on ENCORE database.

92 RBPs can affect the gene expression of SBNO2 :

The Knockdown/knockout RNA-Seq assay for SBNO2 is not available on ENCORE database.

1 RBPs can affect the splicing of SBNO2 :

The Knockdown/knockout RNA-Seq assay for SBNO2 is not avaliable on ENCORE database.