MFSD10

General Information

Gene Name : MFSD10
Gene ID : ENSG00000109736.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MFSD10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MFSD10	ENSG00000109736.14	0.48	3.59	2.04	ENCSR000AEF
HepG2	MFSD10	ENSG00000109736.14	21.78	1.82	11.80	ENCSR985KAT
K562	MFSD10	ENSG00000109736.14	18.83	3.42	11.12	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MFSD10 is not avaliable on ENCORE database.

Proteins bound to RNA

MFSD10 RNA is bound by 25 proteins.

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eCLIP assay for MFSD10 is not avaliable on ENCORE database.

25 proteins are bound to MFSD10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	2936090	2936167	-	5'-UTR,intron-Distal	4.63883	27.22794	HepG2	PRPF8
chr4	2936082	2936165	-	5'-UTR,intron-Distal	5.87801	26.33411	HepG2	FAM120A
chr4	2936084	2936167	-	5'-UTR,intron-Distal	6.78107	25.57209	K562	GTF2F1
chr4	2936094	2936202	-	5'-UTR,intron-Distal,intron-Proximal	4.62759	23.50798	HepG2	RBFOX2
chr4	2936167	2936213	-	5'-UTR,intron-Distal,intron-Proximal	4.68692	21.46127	HepG2	PRPF8
chr4	2936165	2936218	-	5'-UTR,intron-Distal,intron-Proximal	6.62074	20.73411	HepG2	FAM120A
chr4	2936073	2936194	-	5'-UTR,intron-Distal,intron-Proximal	5.25151	20.59898	HepG2	CSTF2T
chr4	2935987	2936071	-	5'-UTR,intron-Distal	4.83182	20.49247	HepG2	RBFOX2
chr4	2935983	2936073	-	5'-UTR,intron-Distal	4.61774	19.31831	HepG2	CSTF2T
chr4	2936494	2936547	-	5'-UTR,intron-Distal,intron-Proximal	5.00302	18.74095	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 88 entries

eCLIP assay for MFSD10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MFSD10 is not available on ENCORE database.
116 RBPs can affect the levels of MFSD10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MFSD10 is not available on ENCORE database.

116 RBPs can affect the gene expression of MFSD10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MFSD10	ENSG00000109736.10	938.52960	405.84060	1.20940	28.79730	27.06080	K562	AGGF1
MFSD10	ENSG00000109736.10	513.13570	128.93990	1.99250	25.97360	24.46380	HepG2	TRIM56
MFSD10	ENSG00000109736.10	493.08900	193.02070	1.35300	23.56410	21.79800	HepG2	HNRNPL
MFSD10	ENSG00000109736.10	552.32540	225.22360	1.29410	23.13700	21.62320	HepG2	SUCLG1
MFSD10	ENSG00000109736.10	513.39320	212.91870	1.26970	22.74220	21.37750	HepG2	PUM1
MFSD10	ENSG00000109736.10	357.74230	132.80940	1.42950	17.23200	15.64100	K562	PTBP1
MFSD10	ENSG00000109736.10	302.17140	116.85060	1.37060	16.64690	15.17780	HepG2	DNAJC2
MFSD10	ENSG00000109736.10	441.04020	131.75180	1.74300	15.90990	13.94170	K562	TARDBP
MFSD10	ENSG00000109736.10	424.71610	198.03820	1.10060	13.83150	12.57960	HepG2	SRSF5
MFSD10	ENSG00000109736.10	295.38420	117.30790	1.33220	13.98770	12.40350	HepG2	PPIL4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 133 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MFSD10 is not available on ENCORE database.

23 RBPs can affect the splicing of MFSD10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933683	2933551	2933663	2933771	2933880	0.21700	0.00000	0.00000	longer	K562	AQR
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.18800	0.00000	0.00001	included	K562	PUS1
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.17900	0.00000	0.00002	included	HepG2	PCBP1
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.44400	0.00000	0.00000	included	HepG2	U2AF1
RI	MFSD10	ENSG00000109736.10	chr4	-	2934326	2934936	2934326	2934485	2934832	2934936	0.30300	0.00000	0.00000	included	HepG2	SF3B4
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.34800	0.00000	0.00000	included	K562	AQR
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.19100	0.00001	0.00023	included	K562	UTP18
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.27000	0.00006	0.00131	included	K562	PRPF8
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.32800	0.00013	0.00227	included	K562	EFTUD2
RI	MFSD10	ENSG00000109736.10	chr4	-	2933551	2933880	2933551	2933663	2933771	2933880	0.10100	0.00018	0.00254	included	K562	AKAP8L

Showing 1 to 10 of 32 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MFSD10

General Information

Functions

Localization

Domains (AlphaFold: MFSD10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MFSD10 is not avaliable on ENCORE database.

25 proteins are bound to MFSD10 RNA:

eCLIP assay for MFSD10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MFSD10 is not available on ENCORE database.

116 RBPs can affect the gene expression of MFSD10 :

The Knockdown/knockout RNA-Seq assay for MFSD10 is not available on ENCORE database.

23 RBPs can affect the splicing of MFSD10 :

The Knockdown/knockout RNA-Seq assay for MFSD10 is not avaliable on ENCORE database.