LAMB1

General Information

Gene Name : LAMB1
Gene ID : ENSG00000091136.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LAMB1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LAMB1	ENSG00000091136.13	0.00	0.03	0.01	ENCSR000AEF
HepG2	LAMB1	ENSG00000091136.13	178.07	166.02	172.05	ENCSR985KAT
K562	LAMB1	ENSG00000091136.13	10.36	9.22	9.79	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LAMB1 is not avaliable on ENCORE database.

Proteins bound to RNA

LAMB1 RNA is bound by 34 proteins.

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eCLIP assay for LAMB1 is not avaliable on ENCORE database.

34 proteins are bound to LAMB1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	107564360	107564532	-	3'-UTR,CDS,intron-Distal	5.05598	400.00000	HepG2	BCLAF1
chr7	107569557	107569637	-	CDS,intron-Distal	4.67327	48.28446	HepG2	BCLAF1
chr7	107643240	107643317	-	CDS,intron-Distal,intron-Proximal	4.70736	45.60003	HepG2	PRPF8
chr7	107564724	107564798	-	CDS,intron-Distal	5.00991	42.94010	HepG2	BCLAF1
chr7	107643293	107643382	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.16353	38.33952	HepG2	DDX3X
chr7	107643147	107643289	-	intron-Distal,intron-Proximal	4.59457	37.97371	HepG2	EFTUD2
chr7	107569858	107569920	-	CDS,intron-Distal,intron-Proximal	4.97102	35.00313	HepG2	BCLAF1
chr7	107570022	107570048	-	CDS,intron-Distal	5.21507	32.67302	HepG2	BCLAF1
chr7	107575871	107575964	-	CDS,intron-Distal	4.57902	31.23560	HepG2	BCLAF1
chr7	107643553	107643605	-	5'-UTR,intron-Distal	3.62368	27.69244	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 156 entries

eCLIP assay for LAMB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LAMB1 is not available on ENCORE database.
147 RBPs can affect the levels of LAMB1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LAMB1 is not available on ENCORE database.

147 RBPs can affect the gene expression of LAMB1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LAMB1	ENSG00000091136.9	2675.31680	12376.24990	-2.20980	281.69950	279.06650	HepG2	SSB
LAMB1	ENSG00000091136.9	2962.89260	7492.18460	-1.33840	94.04590	91.68350	HepG2	DKC1
LAMB1	ENSG00000091136.9	11393.05200	5424.08350	1.07060	77.08600	75.00410	HepG2	SRSF9
LAMB1	ENSG00000091136.9	15151.04560	7830.99490	0.95200	67.81960	65.83620	HepG2	ACO1
LAMB1	ENSG00000091136.9	13689.80750	5992.92760	1.19170	66.33580	64.04930	HepG2	TAF15
LAMB1	ENSG00000091136.9	11644.90930	6543.64850	0.83140	65.25520	63.51980	HepG2	ZNF622
LAMB1	ENSG00000091136.9	23907.78480	11812.45090	1.01710	57.80470	55.63430	HepG2	CELF1
LAMB1	ENSG00000091136.9	2663.00060	7466.49150	-1.48740	50.77500	48.30630	HepG2	SF3B1
LAMB1	ENSG00000091136.9	3839.68820	7015.22320	-0.86950	47.19570	45.13370	HepG2	ZC3H8
LAMB1	ENSG00000091136.9	5792.78750	10471.20940	-0.85410	42.79230	40.74660	HepG2	SRSF7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 175 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LAMB1 is not available on ENCORE database.

3 RBPs can affect the splicing of LAMB1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	LAMB1	ENSG00000091136.9	chr7	-	107572618	107572938	107572618	107572822	107575859	107576101	0.17400	0.00000	0.00000	longer	HepG2	U2AF1
SE	LAMB1	ENSG00000091136.9	chr7	-	107599693	107599925	107595911	107596075	107600135	107600279	-0.11800	0.00001	0.00048	excluded	HepG2	U2AF1
A3SS	LAMB1	ENSG00000091136.9	chr7	-	107616133	107616322	107616133	107616249	107618491	107618612	-0.05200	0.00002	0.00162	shorter	HepG2	U2AF1
A3SS	LAMB1	ENSG00000091136.9	chr7	-	107572618	107572938	107572618	107572822	107575859	107576101	0.13000	0.00018	0.00146	longer	K562	AQR
SE	LAMB1	ENSG00000091136.9	chr7	-	107642571	107642829	107642002	107642178	107643293	107643416	0.05800	0.00063	0.07516	included	HepG2	HNRNPM

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LAMB1

General Information

Functions

Localization

Domains (AlphaFold: LAMB1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LAMB1 is not avaliable on ENCORE database.

34 proteins are bound to LAMB1 RNA:

eCLIP assay for LAMB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LAMB1 is not available on ENCORE database.

147 RBPs can affect the gene expression of LAMB1 :

The Knockdown/knockout RNA-Seq assay for LAMB1 is not available on ENCORE database.

3 RBPs can affect the splicing of LAMB1 :

The Knockdown/knockout RNA-Seq assay for LAMB1 is not avaliable on ENCORE database.