IMPAD1

General Information

Gene Name : IMPAD1
Gene ID : ENSG00000104331.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: IMPAD1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	IMPAD1	ENSG00000104331.8	13.31	11.39	12.35	ENCSR000AEF
HepG2	IMPAD1	ENSG00000104331.8	11.24	22.59	16.91	ENCSR985KAT
K562	IMPAD1	ENSG00000104331.8	15.97	16.97	16.47	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for IMPAD1 is not avaliable on ENCORE database.

Proteins bound to RNA

IMPAD1 RNA is bound by 18 proteins.

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eCLIP assay for IMPAD1 is not avaliable on ENCORE database.

18 proteins are bound to IMPAD1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	57906042	57906131	-	CDS,intron-Distal	6.36734	34.29672	HepG2	DDX3X
chr8	57905948	57906041	-	CDS,intron-Distal,intron-Proximal	4.74311	34.21610	HepG2	DDX3X
chr8	57906191	57906248	-	5'-UTR,intron-Distal	5.35990	26.47889	HepG2	DDX3X
chr8	57906132	57906191	-	5'-UTR,CDS,intron-Distal	5.81419	24.36021	HepG2	DDX3X
chr8	57906248	57906307	-	5'-UTR,intron-Distal	3.84956	19.78194	HepG2	DDX3X
chr8	57875308	57875371	-	3'-UTR,intron-Distal	4.05581	17.55572	K562	PUM2
chr8	57874066	57874122	-	3'-UTR,intron-Distal	3.63273	16.94275	K562	UPF1
chr8	57905888	57905948	-	CDS,intron-Distal,intron-Proximal	5.45651	16.58521	HepG2	DDX3X
chr8	57874626	57874700	-	3'-UTR,intron-Distal	4.13821	16.21043	K562	UPF1
chr8	57870576	57870670	-	3'-UTR,intron-Distal	4.38050	14.24882	K562	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 74 entries

eCLIP assay for IMPAD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for IMPAD1 is not available on ENCORE database.
140 RBPs can affect the levels of IMPAD1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for IMPAD1 is not available on ENCORE database.

140 RBPs can affect the gene expression of IMPAD1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
IMPAD1	ENSG00000104331.4	1306.83540	3876.11300	-1.56850	120.77180	117.48140	HepG2	DDX19B
IMPAD1	ENSG00000104331.4	1548.67710	4190.10270	-1.43590	115.24830	112.57390	HepG2	CKAP4
IMPAD1	ENSG00000104331.4	844.70930	3443.36420	-2.02730	106.39280	104.17030	HepG2	TIAL1
IMPAD1	ENSG00000104331.4	1272.73080	5943.74710	-2.22340	70.78040	67.93220	HepG2	MATR3
IMPAD1	ENSG00000104331.4	1721.13610	4009.70310	-1.22010	64.69210	62.58110	HepG2	DKC1
IMPAD1	ENSG00000104331.4	1453.70680	3148.21400	-1.11480	65.17150	62.29560	HepG2	DNAJC2
IMPAD1	ENSG00000104331.4	2203.91660	4247.11830	-0.94640	59.90190	57.90470	HepG2	PUM1
IMPAD1	ENSG00000104331.4	1954.29090	5790.71740	-1.56710	53.54870	52.05140	HepG2	SRSF1
IMPAD1	ENSG00000104331.4	1992.73490	3680.06000	-0.88500	49.89220	47.80530	HepG2	SMN1
IMPAD1	ENSG00000104331.4	2363.42080	5930.37920	-1.32720	41.39750	39.86160	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 167 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for IMPAD1 is not available on ENCORE database.

14 RBPs can affect the splicing of IMPAD1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.24100	0.00000	0.00000	included	K562	AQR
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.22400	0.00000	0.00013	included	K562	SUPV3L1
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.20100	0.00000	0.00000	included	HepG2	MATR3
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	-0.14700	0.00000	0.00001	excluded	K562	PTBP1
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.39400	0.00000	0.00000	included	K562	HNRNPC
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.05200	0.00001	0.00094	included	HepG2	RBM22
A3SS	IMPAD1	ENSG00000104331.4	chr8	-	57892593	57892815	57892593	57892756	57905757	57906403	0.11800	0.00006	0.00058	longer	K562	AQR
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	-0.13400	0.00007	0.00312	excluded	K562	RBM15
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	-0.16000	0.00007	0.00311	excluded	K562	AGGF1
SE	IMPAD1	ENSG00000104331.4	chr8	-	57879668	57879777	57878749	57878911	57890608	57890704	0.08100	0.00025	0.02375	included	HepG2	TIAL1

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

IMPAD1

General Information

Functions

Localization

Domains (AlphaFold: IMPAD1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for IMPAD1 is not avaliable on ENCORE database.

18 proteins are bound to IMPAD1 RNA:

eCLIP assay for IMPAD1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for IMPAD1 is not available on ENCORE database.

140 RBPs can affect the gene expression of IMPAD1 :

The Knockdown/knockout RNA-Seq assay for IMPAD1 is not available on ENCORE database.

14 RBPs can affect the splicing of IMPAD1 :

The Knockdown/knockout RNA-Seq assay for IMPAD1 is not avaliable on ENCORE database.