ERF

General Information

Gene Name : ERF
Gene ID : ENSG00000105722.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ERF)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ERF	ENSG00000105722.9	3.12	12.13	7.62	ENCSR000AEF
HepG2	ERF	ENSG00000105722.9	75.97	46.59	61.28	ENCSR985KAT
K562	ERF	ENSG00000105722.9	32.98	19.45	26.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ERF is not avaliable on ENCORE database.

Proteins bound to RNA

ERF RNA is bound by 54 proteins.

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eCLIP assay for ERF is not avaliable on ENCORE database.

54 proteins are bound to ERF RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	42757520	42757587	-	intron-Distal	4.96061	76.44005	HepG2	CSTF2T
chr19	42758733	42758814	-	5'-UTR,intron-Distal,intron-Proximal	4.57122	66.86864	HepG2	CSTF2T
chr19	42758902	42758980	-	intron-Distal	4.78195	48.74671	HepG2	CSTF2T
chr19	42757688	42757772	-	intron-Distal	4.28380	44.83018	HepG2	CSTF2T
chr19	42755050	42755153	-	intron-Distal	4.47994	43.36426	HepG2	CSTF2T
chr19	42759180	42759265	-	5'-UTR,intron-Distal,intron-Proximal	3.82735	43.07328	HepG2	CSTF2T
chr19	42756747	42756812	-	intron-Distal	5.34164	40.63259	HepG2	CSTF2T
chr19	42759011	42759066	-	intron-Distal	4.38912	38.70209	HepG2	CSTF2T
chr19	42757341	42757423	-	intron-Distal	3.77600	36.99775	HepG2	CSTF2T
chr19	42751995	42752059	-	3'-UTR,intron-Distal	5.35684	36.88486	K562	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 384 entries

eCLIP assay for ERF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ERF is not available on ENCORE database.
131 RBPs can affect the levels of ERF.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ERF is not available on ENCORE database.

131 RBPs can affect the gene expression of ERF :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ERF	ENSG00000105722.5	1779.52540	788.31020	1.17460	41.78900	39.75540	HepG2	SRSF5
ERF	ENSG00000105722.5	3398.36280	1729.82930	0.97410	39.38340	37.21120	K562	DDX47
ERF	ENSG00000105722.5	1618.37480	847.54640	0.93310	32.79710	31.21530	HepG2	PUM1
ERF	ENSG00000105722.5	2353.59550	1390.60710	0.75910	21.71110	20.47660	HepG2	NELFE
ERF	ENSG00000105722.5	836.61260	323.90020	1.36890	22.59580	20.15880	K562	TARDBP
ERF	ENSG00000105722.5	580.51490	225.67050	1.36300	21.72130	19.44870	K562	EIF3G
ERF	ENSG00000105722.5	510.13280	1220.65840	-1.25870	19.61520	18.31550	HepG2	TAF15
ERF	ENSG00000105722.5	950.38280	398.24290	1.25480	21.56970	18.12410	K562	SRFBP1
ERF	ENSG00000105722.5	931.05890	320.11210	1.54020	19.30440	17.44520	K562	SRSF1
ERF	ENSG00000105722.5	830.94000	326.49880	1.34760	18.96560	17.30570	K562	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 147 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ERF is not available on ENCORE database.

5 RBPs can affect the splicing of ERF :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ERF	ENSG00000105722.5	chr19	-	42754482	42754717	42753978	42754094	42759129	42759309	-0.17600	0.00000	0.00002	excluded	HepG2	RBM22
SE	ERF	ENSG00000105722.5	chr19	-	42754259	42754368	42753978	42754094	42754482	42754593	0.08700	0.00000	0.00000	included	K562	AQR
A3SS	ERF	ENSG00000105722.5	chr19	-	42753978	42754157	42753978	42754094	42754482	42754593	0.36000	0.00000	0.00000	longer	K562	AQR
SE	ERF	ENSG00000105722.5	chr19	-	42754482	42754717	42753978	42754094	42759129	42759309	-0.10900	0.00012	0.00336	excluded	HepG2	U2AF1
SE	ERF	ENSG00000105722.5	chr19	-	42754482	42754717	42753978	42754094	42759129	42759309	-0.06100	0.00020	0.02900	excluded	HepG2	LARP4
A3SS	ERF	ENSG00000105722.5	chr19	-	42753773	42753881	42753773	42753810	42753978	42754094	0.56600	0.00041	0.06608	longer	HepG2	TIAL1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ERF

General Information

Functions

Localization

Domains (AlphaFold: ERF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ERF is not avaliable on ENCORE database.

54 proteins are bound to ERF RNA:

eCLIP assay for ERF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ERF is not available on ENCORE database.

131 RBPs can affect the gene expression of ERF :

The Knockdown/knockout RNA-Seq assay for ERF is not available on ENCORE database.

5 RBPs can affect the splicing of ERF :

The Knockdown/knockout RNA-Seq assay for ERF is not avaliable on ENCORE database.