EMC7

General Information

Gene Name : EMC7
Gene ID : ENSG00000134153.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EMC7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EMC7	ENSG00000134153.9	36.47	36.93	36.70	ENCSR000AEF
HepG2	EMC7	ENSG00000134153.9	53.67	77.49	65.58	ENCSR985KAT
K562	EMC7	ENSG00000134153.9	73.48	62.41	67.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EMC7 is not avaliable on ENCORE database.

Proteins bound to RNA

EMC7 RNA is bound by 10 proteins.

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eCLIP assay for EMC7 is not avaliable on ENCORE database.

10 proteins are bound to EMC7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	34393967	34394017	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.45132	48.62775	HepG2	DDX3X
chr15	34393897	34394069	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.41395	29.28093	K562	DDX3X
chr15	34394017	34394060	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.05983	27.99210	HepG2	DDX3X
chr15	34393826	34393911	-	CDS,intron-Distal	4.12589	13.35431	HepG2	RPS3
chr15	34393918	34393967	-	CDS,intron-Distal	3.79247	13.13583	HepG2	DDX3X
chr15	34393911	34394034	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.86732	11.19306	HepG2	RPS3
chr15	34388113	34388178	-	CDS,intron-Distal	5.13413	9.12064	HepG2	LIN28B
chr15	34382584	34382644	-	CDS,intron-Distal	4.74582	7.85193	K562	YBX3
chr15	34376330	34376414	-	3'-UTR,intron-Distal	4.49471	7.36168	HepG2	SUB1
chr15	34393860	34394015	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.47248	7.30450	K562	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 26 entries

eCLIP assay for EMC7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EMC7 is not available on ENCORE database.
103 RBPs can affect the levels of EMC7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.

103 RBPs can affect the gene expression of EMC7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EMC7	ENSG00000134153.5	2188.91850	1139.56170	0.94160	40.89730	39.43480	HepG2	ZNF622
EMC7	ENSG00000134153.5	2152.88650	925.89790	1.21720	28.13040	26.55400	HepG2	BOP1
EMC7	ENSG00000134153.5	874.92080	1662.07760	-0.92580	25.88470	24.33870	HepG2	RECQL
EMC7	ENSG00000134153.5	992.54200	1784.52110	-0.84630	22.17880	20.93300	HepG2	NELFE
EMC7	ENSG00000134153.5	2146.84080	1147.54920	0.90360	20.85190	19.10030	HepG2	CALR
EMC7	ENSG00000134153.5	406.38770	909.71830	-1.16260	17.65580	15.76280	HepG2	RPS2
EMC7	ENSG00000134153.5	3615.31600	1866.34780	0.95380	15.91290	14.53930	HepG2	DDX3X
EMC7	ENSG00000134153.5	1191.16660	568.58170	1.06680	16.22950	14.39230	K562	PRPF8
EMC7	ENSG00000134153.5	2105.19270	1354.63120	0.63600	14.87250	13.50470	HepG2	AUH
EMC7	ENSG00000134153.5	2351.55300	1341.05110	0.81010	13.02230	11.88390	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.

2 RBPs can affect the splicing of EMC7 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	EMC7	ENSG00000134153.5	chr15	-	34382517	34382656			34380253	34380334	34388095	34388210	-0.12300	0.00000	0.00000	excluded	K562	AQR
A3SS	EMC7	ENSG00000134153.5	chr15	-	34380253	34380487			34380253	34380334	34382517	34382705	0.05400	0.00000	0.00000	longer	K562	AQR
MXE	EMC7	ENSG00000134153.5	chr15	-	34382517	34382656	34388095	34388210	34380253	34380334	34393804	34394008	0.13200	0.00000	0.00000	1included	K562	AQR
MXE	EMC7	ENSG00000134153.5	chr15	-	34382517	34382656	34388095	34388243	34380253	34380334	34393804	34394008	0.13900	0.00000	0.00000	1included	K562	AQR
MXE	EMC7	ENSG00000134153.5	chr15	-	34382517	34382656	34388095	34388246	34380253	34380334	34393804	34394008	0.13300	0.00000	0.00000	1included	K562	AQR
MXE	EMC7	ENSG00000134153.5	chr15	-	34380253	34380334	34388095	34388215	34376217	34376687	34393804	34394149	0.07400	0.00005	0.00338	1included	K562	FXR2
MXE	EMC7	ENSG00000134153.5	chr15	-	34380253	34380334	34382517	34382656	34376217	34376687	34388095	34388215	-0.08600	0.00443	0.03240	2included	K562	AQR

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EMC7

General Information

Functions

Localization

Domains (AlphaFold: EMC7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EMC7 is not avaliable on ENCORE database.

10 proteins are bound to EMC7 RNA:

eCLIP assay for EMC7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.

103 RBPs can affect the gene expression of EMC7 :

The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.

2 RBPs can affect the splicing of EMC7 :

The Knockdown/knockout RNA-Seq assay for EMC7 is not avaliable on ENCORE database.