EIF5A

General Information

Gene Name : EIF5A
Gene ID : ENSG00000132507.17
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EIF5A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EIF5A	ENSG00000132507.17	379.32	741.90	560.61	ENCSR000AEF
HepG2	EIF5A	ENSG00000132507.17	550.10	480.78	515.44	ENCSR985KAT
K562	EIF5A	ENSG00000132507.17	865.69	782.48	824.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EIF5A is not avaliable on ENCORE database.

Proteins bound to RNA

EIF5A RNA is bound by 34 proteins.

CanvasJS.com

eCLIP assay for EIF5A is not avaliable on ENCORE database.

34 proteins are bound to EIF5A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	7215446	7215493	+	3'-UTR	6.00393	400.00000	HepG2	UPF1
chr17	7215503	7215539	+	3'-UTR	4.01078	400.00000	K562	UPF1
chr17	7215541	7215604	+	3'-UTR	6.17524	400.00000	HepG2	UPF1
chr17	7215259	7215330	+	3'-UTR	5.82449	400.00000	HepG2	UPF1
chr17	7215503	7215541	+	3'-UTR	5.49083	400.00000	HepG2	UPF1
chr17	7215539	7215591	+	3'-UTR	3.92163	400.00000	K562	UPF1
chr17	7215493	7215503	+	3'-UTR	3.28651	400.00000	K562	UPF1
chr17	7215449	7215492	+	3'-UTR	3.76335	400.00000	K562	UPF1
chr17	7215662	7215699	+	3'-UTR	4.93232	86.75466	K562	UPF1
chr17	7215505	7215536	+	3'-UTR	3.81680	86.74088	K562	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 184 entries

eCLIP assay for EIF5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EIF5A is not available on ENCORE database.
126 RBPs can affect the levels of EIF5A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EIF5A is not available on ENCORE database.

126 RBPs can affect the gene expression of EIF5A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EIF5A	ENSG00000132507.13	4106.27310	8121.24500	-0.98390	59.52540	57.91290	HepG2	SSB
EIF5A	ENSG00000132507.13	1774.32560	4314.82860	-1.28200	50.20970	48.57540	HepG2	TIAL1
EIF5A	ENSG00000132507.13	6491.16080	9637.40510	-0.57020	38.11750	35.89700	K562	NSUN2
EIF5A	ENSG00000132507.13	2813.05930	4741.01820	-0.75310	36.98470	35.09080	HepG2	ZC3H8
EIF5A	ENSG00000132507.13	6510.29530	3889.99170	0.74290	33.96700	32.22350	HepG2	UTP3
EIF5A	ENSG00000132507.13	3386.64730	6778.89630	-1.00120	26.01040	24.36330	HepG2	RPLP0
EIF5A	ENSG00000132507.13	3600.17170	6733.79170	-0.90340	26.13240	23.68190	K562	CPSF6
EIF5A	ENSG00000132507.13	2602.08840	5674.10350	-1.12470	22.71050	21.11140	HepG2	SUPV3L1
EIF5A	ENSG00000132507.13	4289.98840	7678.33520	-0.83980	21.99020	20.38800	K562	HNRNPC
EIF5A	ENSG00000132507.13	10525.19520	5946.37430	0.82370	21.71180	20.12800	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 167 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EIF5A is not available on ENCORE database.

10 RBPs can affect the splicing of EIF5A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	EIF5A	ENSG00000132507.13	chr17	+	7210910	7211071			7210317	7210434	7212933	7213119	-0.29400	0.00000	0.00000	excluded	K562	TAF15
SE	EIF5A	ENSG00000132507.13	chr17	+	7210910	7211071			7210317	7210434	7212933	7213119	0.10500	0.00000	0.00401	included	HepG2	SMNDC1
RI	EIF5A	ENSG00000132507.13	chr17	+	7214668	7214970			7214668	7214800	7214896	7214970	0.07900	0.00000	0.00000	included	K562	AQR
SE	EIF5A	ENSG00000132507.13	chr17	+	7211811	7211894			7211292	7211432	7212933	7213119	-0.09200	0.00006	0.00853	excluded	HepG2	DDX3X
SE	EIF5A	ENSG00000132507.13	chr17	+	7210910	7211071			7210317	7210434	7212933	7213420	-0.08500	0.00007	0.00577	excluded	K562	HNRNPK
SE	EIF5A	ENSG00000132507.13	chr17	+	7211799	7211894			7211292	7211432	7212933	7213119	-0.07300	0.00021	0.04116	excluded	K562	EIF4G2
RI	EIF5A	ENSG00000132507.13	chr17	+	7214668	7214970			7214668	7214800	7214864	7214970	-0.34700	0.00029	0.00457	excluded	HepG2	RBM22
SE	EIF5A	ENSG00000132507.13	chr17	+	7211811	7211894			7211292	7211432	7212933	7213119	-0.09300	0.00058	0.03797	excluded	HepG2	NCBP2
MXE	EIF5A	ENSG00000132507.13	chr17	+	7212933	7213119	7214336	7214441	7210900	7211071	7214668	7214970	0.07600	0.00083	0.05703	1included	HepG2	SRSF7
SE	EIF5A	ENSG00000132507.13	chr17	+	7210910	7211071			7210317	7210434	7212933	7213119	-0.10700	0.00619	0.08500	excluded	K562	U2AF2

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EIF5A

General Information

Functions

Localization

Domains (AlphaFold: EIF5A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EIF5A is not avaliable on ENCORE database.

34 proteins are bound to EIF5A RNA:

eCLIP assay for EIF5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EIF5A is not available on ENCORE database.

126 RBPs can affect the gene expression of EIF5A :

The Knockdown/knockout RNA-Seq assay for EIF5A is not available on ENCORE database.

10 RBPs can affect the splicing of EIF5A :

The Knockdown/knockout RNA-Seq assay for EIF5A is not avaliable on ENCORE database.