EIF3J

General Information

Gene Name : EIF3J
Gene ID : ENSG00000104131.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EIF3J)

Not Available

Antibody Validation

Bethyl Labs: A301-746A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EIF3J	ENSG00000104131.12	102.23	85.53	93.88	ENCSR000AEF
HepG2	EIF3J	ENSG00000104131.12	76.67	115.11	95.89	ENCSR985KAT
K562	EIF3J	ENSG00000104131.12	138.64	144.44	141.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
EIF3J		A301-746A	1				BGHcLV41-31, Submitted, ENCORE2	BGKcLV38-53, Submitted, ENCORE2

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
EIF3J	K562	CRISPR			EIF3J-BGKcLV38-53,EIF3J-BGKcLV38-54	NT-BGKcLV38-1,NT-BGKcLV38-2	74.4,82.3	Submitting	ENCORE2
EIF3J	HepG2	CRISPR			EIF3J-BGHcLV41-31,EIF3J-BGHcLV41-32	NT-BGHcLV41-1,NT-BGHcLV41-2	90.9,94.2	Submitting	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
EIF3J	Product_ID: A301-746A Lot_ID: 1 Source: Bethyl Labs Target Name: EIF3J-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EIF3J is not avaliable on ENCORE database.

Proteins bound to RNA

EIF3J RNA is bound by 21 proteins.

CanvasJS.com

eCLIP assay for EIF3J is not avaliable on ENCORE database.

21 proteins are bound to EIF3J RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	44829616	44829670	+	CDS,intron-Proximal	5.03277	57.74167	HepG2	PRPF8
chr15	44829587	44829616	+	CDS	4.14362	37.60286	HepG2	PRPF8
chr15	44846766	44846840	+	CDS	3.41238	24.74485	K562	UCHL5
chr15	44843704	44843721	+	CDS,intron-Distal,intron-Proximal	3.33054	19.72173	K562	ZNF800
chr15	44843636	44843715	+	CDS,intron-Distal	4.22833	19.20990	K562	ZNF622
chr15	44853215	44853307	+	CDS,intron-Proximal	4.10292	18.88686	K562	UCHL5
chr15	44846750	44846766	+	CDS,intron-Proximal	3.75309	18.63676	K562	UCHL5
chr15	44846770	44846793	+	CDS	4.77810	17.78166	K562	ZNF622
chr15	44846750	44846770	+	CDS,intron-Proximal	4.47044	17.48803	K562	ZNF622
chr15	44846750	44846770	+	CDS,intron-Proximal	3.67223	17.44194	K562	ZNF800
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 59 entries

eCLIP assay for EIF3J is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for EIF3J is not available on ENCORE database.
107 RBPs can affect the levels of EIF3J.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EIF3J is not available on ENCORE database.

107 RBPs can affect the gene expression of EIF3J :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EIF3J	ENSG00000104131.8	926.63600	2010.00110	-1.11710	50.54750	48.13030	HepG2	HNRNPL
EIF3J	ENSG00000104131.8	10137.70610	6476.41650	0.64640	24.83540	23.07340	K562	DDX47
EIF3J	ENSG00000104131.8	1596.90660	2490.38590	-0.64110	18.06470	16.99770	HepG2	SSB
EIF3J	ENSG00000104131.8	3313.46240	5852.83090	-0.82080	19.42930	16.60390	K562	HNRNPL
EIF3J	ENSG00000104131.8	3393.92300	2176.72740	0.64070	18.04570	16.29770	HepG2	EIF4G1
EIF3J	ENSG00000104131.8	4177.97890	2722.57930	0.61770	16.48080	15.11200	K562	FXR1
EIF3J	ENSG00000104131.8	864.33360	1519.38280	-0.81380	15.99360	14.96970	HepG2	TIAL1
EIF3J	ENSG00000104131.8	3030.99360	4789.12890	-0.66000	13.65240	11.89080	K562	CPSF6
EIF3J	ENSG00000104131.8	3671.48860	4720.59070	-0.36260	12.47060	11.04580	K562	NSUN2
EIF3J	ENSG00000104131.8	3747.07920	5005.33160	-0.41770	10.90920	9.59940	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 132 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EIF3J

General Information

Functions

Localization

Domains (AlphaFold: EIF3J)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EIF3J is not avaliable on ENCORE database.

21 proteins are bound to EIF3J RNA:

eCLIP assay for EIF3J is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EIF3J is not available on ENCORE database.

107 RBPs can affect the gene expression of EIF3J :

The Knockdown/knockout RNA-Seq assay for EIF3J is not available on ENCORE database.

No RBPs affect the alternative splcing events of EIF3J on ENCORE database.

The Knockdown/knockout RNA-Seq assay for EIF3J is not avaliable on ENCORE database.