DMKN

General Information

Gene Name : DMKN
Gene ID : ENSG00000161249.20
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DMKN)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DMKN	ENSG00000161249.20	64.32	61.74	63.03	ENCSR000AEF
HepG2	DMKN	ENSG00000161249.20	60.46	77.50	68.98	ENCSR985KAT
K562	DMKN	ENSG00000161249.20	0.03	0.00	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DMKN is not avaliable on ENCORE database.

Proteins bound to RNA

DMKN RNA is bound by 11 proteins.

CanvasJS.com

eCLIP assay for DMKN is not avaliable on ENCORE database.

11 proteins are bound to DMKN RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	35990934	35991012	-	3'-UTR,intron-Distal,intron-Proximal	5.05591	17.90517	HepG2	EFTUD2
chr19	35991365	35991438	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.32307	11.07163	HepG2	EFTUD2
chr19	36000561	36000673	-	intron-Distal	4.54073	7.75161	HepG2	QKI
chr19	36000764	36000860	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.54506	7.72177	HepG2	PRPF8
chr19	35991289	35991339	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90319	7.67357	HepG2	EFTUD2
chr19	36001039	36001112	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.97044	7.59497	HepG2	PRPF8
chr19	36000874	36000926	-	intron-Distal,intron-Proximal	5.41471	7.45449	HepG2	SF3B4
chr19	35990787	35990858	-	3'-UTR,intron-Distal,intron-Proximal	5.01735	7.02967	HepG2	PRPF8
chr19	35989560	35989658	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.21319	6.23414	HepG2	BUD13
chr19	35992973	35993044	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90652	5.61068	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for DMKN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DMKN is not available on ENCORE database.
100 RBPs can affect the levels of DMKN.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DMKN is not available on ENCORE database.

100 RBPs can affect the gene expression of DMKN :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DMKN	ENSG00000161249.16	1971.17570	969.23340	1.02400	37.60320	36.30960	HepG2	SRFBP1
DMKN	ENSG00000161249.16	1713.32500	809.39230	1.08180	26.43280	24.25370	HepG2	RBM15
DMKN	ENSG00000161249.16	1081.39260	560.40870	0.94820	23.78230	22.46020	HepG2	SRSF9
DMKN	ENSG00000161249.16	401.51340	841.53790	-1.06760	22.47070	21.31660	HepG2	SSB
DMKN	ENSG00000161249.16	1549.02600	858.12930	0.85200	19.09060	17.97930	HepG2	RBM22
DMKN	ENSG00000161249.16	1109.20040	619.24700	0.84080	16.29010	15.09500	HepG2	TAF15
DMKN	ENSG00000161249.16	75.37660	5.15380	3.87030	15.27710	13.47650	K562	SF3A3
DMKN	ENSG00000161249.16	1349.23570	660.64990	1.03010	14.46530	13.17900	HepG2	EIF2S1
DMKN	ENSG00000161249.16	90.71250	9.03050	3.32830	13.12200	11.16530	K562	BOP1
DMKN	ENSG00000161249.16	368.91160	602.72860	-0.70820	9.95070	9.07440	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 118 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DMKN is not available on ENCORE database.

29 RBPs can affect the splicing of DMKN :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DMKN	ENSG00000161249.16	chr19	-	35988548	35988583			35988121	35988440	35989617	35989665	-0.23000	0.00000	0.00020	excluded	HepG2	RBM22
SE	DMKN	ENSG00000161249.16	chr19	-	36000812	36000863			35996840	35996888	36001085	36001300	0.26500	0.00000	0.00000	included	HepG2	HNRNPK
SE	DMKN	ENSG00000161249.16	chr19	-	35988548	35988583			35988121	35988440	35989499	35989665	0.63000	0.00000	0.00021	included	HepG2	SRSF1
SE	DMKN	ENSG00000161249.16	chr19	-	36000812	36000863			35996840	35996888	36001085	36001300	-0.33300	0.00000	0.00000	excluded	HepG2	SRSF1
RI	DMKN	ENSG00000161249.16	chr19	-	35990859	35991482			35990859	35990931	35991434	35991482	-0.25100	0.00000	0.00000	excluded	HepG2	U2AF2
RI	DMKN	ENSG00000161249.16	chr19	-	35990859	35991482			35990859	35990931	35991434	35991482	-0.19200	0.00000	0.00042	excluded	HepG2	SUGP2
MXE	DMKN	ENSG00000161249.16	chr19	-	35996840	35996888	36000812	36000863	35996619	35996667	36001085	36001154	-0.22000	0.00000	0.00000	2included	HepG2	SRSF1
MXE	DMKN	ENSG00000161249.16	chr19	-	35996619	35996667	36000812	36000863	35993731	35993788	36001085	36001154	-0.33200	0.00000	0.00000	2included	HepG2	SRSF1
RI	DMKN	ENSG00000161249.16	chr19	-	35990859	35991482			35990859	35990931	35991434	35991482	-0.22000	0.00001	0.00231	excluded	HepG2	HNRNPUL1
MXE	DMKN	ENSG00000161249.16	chr19	-	35996840	35996951	36000812	36000863	35996619	35996667	36001085	36001154	-0.27400	0.00001	0.00028	2included	HepG2	SRSF1

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DMKN

General Information

Functions

Localization

Domains (AlphaFold: DMKN)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DMKN is not avaliable on ENCORE database.

11 proteins are bound to DMKN RNA:

eCLIP assay for DMKN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DMKN is not available on ENCORE database.

100 RBPs can affect the gene expression of DMKN :

The Knockdown/knockout RNA-Seq assay for DMKN is not available on ENCORE database.

29 RBPs can affect the splicing of DMKN :

The Knockdown/knockout RNA-Seq assay for DMKN is not avaliable on ENCORE database.