C2orf43

General Information

Gene Name : C2orf43
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C2orf43)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C2orf43 is not avaliable on ENCORE database.

Proteins bound to RNA

C2orf43 RNA is bound by 19 proteins.

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eCLIP assay for C2orf43 is not avaliable on ENCORE database.

19 proteins are bound to C2orf43 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	21021631	21021739	-	intron-Distal	4.01355	14.01484	HepG2	CSTF2
chr2	21011781	21011876	-	intron-Distal	5.42632	10.85098	HepG2	QKI
chr2	20922996	20923074	-	intron-Distal	3.80804	8.94372	HepG2	QKI
chr2	20886619	20886687	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.45901	7.87748	K562	PUM2
chr2	20954869	20954956	-	intron-Distal	3.45223	7.54631	HepG2	HNRNPL
chr2	20974518	20974600	-	CDS,intron-Distal,intron-Proximal	4.25713	7.02084	HepG2	PRPF8
chr2	21022790	21022848	-	5'-UTR,intron-Distal,intron-Proximal	4.04289	6.88952	HepG2	NCBP2
chr2	21001108	21001226	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.22244	6.19788	K562	DDX3X
chr2	20974685	20974740	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.99859	5.79432	HepG2	BCLAF1
chr2	20939811	20939946	-	CDS,intron-Distal,intron-Proximal	4.49858	5.64683	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 29 entries

eCLIP assay for C2orf43 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C2orf43 is not available on ENCORE database.
97 RBPs can affect the levels of C2orf43.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C2orf43 is not available on ENCORE database.

97 RBPs can affect the gene expression of C2orf43 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C2orf43	ENSG00000118961.10	271.96910	1008.09810	-1.89010	26.90340	25.51640	HepG2	SRSF9
C2orf43	ENSG00000118961.10	275.18200	720.23990	-1.38810	24.27910	22.05600	HepG2	EWSR1
C2orf43	ENSG00000118961.10	422.52680	1166.07330	-1.46450	23.10480	21.29740	HepG2	EIF4A3
C2orf43	ENSG00000118961.10	387.47030	899.21050	-1.21460	20.66120	19.10570	K562	HNRNPC
C2orf43	ENSG00000118961.10	745.18050	1226.37510	-0.71870	14.96280	13.44880	K562	UPF1
C2orf43	ENSG00000118961.10	421.13440	843.95200	-1.00290	13.33520	11.91840	HepG2	HNRNPC
C2orf43	ENSG00000118961.10	632.26300	1111.98150	-0.81450	12.88280	11.49910	HepG2	PUM2
C2orf43	ENSG00000118961.10	498.31840	821.91490	-0.72190	11.92590	10.87330	HepG2	TRIM56
C2orf43	ENSG00000118961.10	585.81150	1104.84200	-0.91530	12.21640	10.85150	HepG2	HNRNPK
C2orf43	ENSG00000118961.10	563.03560	1113.66120	-0.98400	11.68320	10.65520	HepG2	TAF15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 118 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C2orf43 is not available on ENCORE database.

9 RBPs can affect the splicing of C2orf43 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	-0.39300	0.00000	0.00000	excluded	HepG2	U2AF2
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	-0.22300	0.00000	0.00036	excluded	K562	LARP4
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	0.09000	0.00050	0.01189	included	K562	SRSF1
SE	C2orf43	ENSG00000118961.10	chr2	-	21001069	21001225			20990014	20990158	21022796	21022874	-0.11000	0.00072	0.01582	excluded	K562	SRSF1
SE	C2orf43	ENSG00000118961.10	chr2	-	20990014	20990158			20974569	20974739	21001069	21001225	0.11700	0.00080	0.02124	included	HepG2	SRSF1
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	-0.21400	0.00086	0.09804	excluded	K562	HNRNPM
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	-0.14100	0.00112	0.06999	excluded	K562	HNRNPUL1
SE	C2orf43	ENSG00000118961.10	chr2	-	20939730	20939965			20901329	20901412	20974569	20974739	-0.13600	0.00284	0.09601	excluded	HepG2	SFPQ
MXE	C2orf43	ENSG00000118961.10	chr2	-	20990014	20990158	21001051	21001225	20974617	20974739	21022796	21022849	-0.15600	0.00358	0.09417	2included	HepG2	SF3B4
SE	C2orf43	ENSG00000118961.10	chr2	-	21001069	21001225			20990014	20990158	21022796	21022874	-0.11600	0.00556	0.09550	excluded	HepG2	SRSF1

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C2orf43

General Information

Functions

Localization

Domains (AlphaFold: C2orf43)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C2orf43 is not avaliable on ENCORE database.

19 proteins are bound to C2orf43 RNA:

eCLIP assay for C2orf43 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C2orf43 is not available on ENCORE database.

97 RBPs can affect the gene expression of C2orf43 :

The Knockdown/knockout RNA-Seq assay for C2orf43 is not available on ENCORE database.

9 RBPs can affect the splicing of C2orf43 :

The Knockdown/knockout RNA-Seq assay for C2orf43 is not avaliable on ENCORE database.