BMP4

General Information

Gene Name : BMP4
Gene ID : ENSG00000125378.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BMP4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BMP4	ENSG00000125378.15	0.13	0.41	0.27	ENCSR000AEF
HepG2	BMP4	ENSG00000125378.15	103.00	77.94	90.47	ENCSR985KAT
K562	BMP4	ENSG00000125378.15	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BMP4 is not avaliable on ENCORE database.

Proteins bound to RNA

BMP4 RNA is bound by 37 proteins.

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eCLIP assay for BMP4 is not avaliable on ENCORE database.

37 proteins are bound to BMP4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	54420484	54420538	-	intron-Distal	5.71754	52.02286	HepG2	XPO5
chr14	54418503	54418540	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.32756	37.48537	HepG2	AQR
chr14	54420538	54420591	-	intron-Distal	5.08849	32.56162	HepG2	XPO5
chr14	54421455	54421545	-	intron-Distal	4.61942	32.26309	HepG2	CSTF2T
chr14	54420782	54420900	-	intron-Distal	3.46729	31.56138	HepG2	CSTF2T
chr14	54416635	54416678	-	3'-UTR,intron-Distal	3.27310	31.09074	HepG2	HNRNPL
chr14	54423423	54423514	-	5'-UTR,intron-Distal,intron-Proximal	3.88333	29.84146	HepG2	BUD13
chr14	54420908	54421013	-	intron-Distal	4.77078	29.35198	HepG2	RBFOX2
chr14	54418540	54418571	-	CDS,intron-Distal,intron-Proximal	5.65420	29.27950	HepG2	AQR
chr14	54418476	54418574	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78640	28.83842	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 145 entries

eCLIP assay for BMP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for BMP4 is not available on ENCORE database.
122 RBPs can affect the levels of BMP4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for BMP4 is not available on ENCORE database.

122 RBPs can affect the gene expression of BMP4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BMP4	ENSG00000125378.11	1013.06560	3566.52410	-1.81580	131.70650	129.61330	HepG2	SSB
BMP4	ENSG00000125378.11	674.74410	2437.90370	-1.85320	105.46630	103.01440	HepG2	DKC1
BMP4	ENSG00000125378.11	1236.61250	3636.85910	-1.55630	79.41880	77.40770	HepG2	RBM22
BMP4	ENSG00000125378.11	1051.30500	2588.27520	-1.29980	72.86860	70.40650	HepG2	ZC3H8
BMP4	ENSG00000125378.11	495.71810	1923.65490	-1.95630	63.35080	61.12630	HepG2	HNRNPA1
BMP4	ENSG00000125378.11	1793.74080	4351.25510	-1.27850	58.03420	55.93790	HepG2	ETF1
BMP4	ENSG00000125378.11	820.35670	2346.96130	-1.51650	50.87060	47.70960	HepG2	DDX24
BMP4	ENSG00000125378.11	4207.37990	2083.84050	1.01360	49.55280	47.55680	HepG2	TRIM56
BMP4	ENSG00000125378.11	1230.16250	2890.60150	-1.23250	39.64510	37.46430	HepG2	CALR
BMP4	ENSG00000125378.11	1019.73120	2264.45490	-1.15100	31.34180	28.62410	HepG2	EIF3G
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 122 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for BMP4 is not available on ENCORE database.

3 RBPs can affect the splicing of BMP4 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	BMP4	ENSG00000125378.11	chr14	-	54423267	54423529	54423476	54423529	54419993	54420118	0.20400	0.00002	0.00210	longer	HepG2	HNRNPK
A5SS	BMP4	ENSG00000125378.11	chr14	-	54423267	54423529	54423476	54423529	54419993	54420118	-0.23200	0.00007	0.01130	shorter	HepG2	RBM22
A5SS	BMP4	ENSG00000125378.11	chr14	-	54423267	54423529	54423476	54423529	54419993	54420118	0.39900	0.00059	0.02585	longer	HepG2	U2AF2

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BMP4

General Information

Functions

Localization

Domains (AlphaFold: BMP4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BMP4 is not avaliable on ENCORE database.

37 proteins are bound to BMP4 RNA:

eCLIP assay for BMP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BMP4 is not available on ENCORE database.

122 RBPs can affect the gene expression of BMP4 :

The Knockdown/knockout RNA-Seq assay for BMP4 is not available on ENCORE database.

3 RBPs can affect the splicing of BMP4 :

The Knockdown/knockout RNA-Seq assay for BMP4 is not avaliable on ENCORE database.