ALDH7A1

General Information

Gene Name : ALDH7A1
Gene ID : ENSG00000164904.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ALDH7A1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ALDH7A1	ENSG00000164904.17	0.28	0.33	0.31	ENCSR000AEF
HepG2	ALDH7A1	ENSG00000164904.17	136.32	171.60	153.96	ENCSR985KAT
K562	ALDH7A1	ENSG00000164904.17	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ALDH7A1 is not avaliable on ENCORE database.

Proteins bound to RNA

ALDH7A1 RNA is bound by 9 proteins.

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eCLIP assay for ALDH7A1 is not avaliable on ENCORE database.

9 proteins are bound to ALDH7A1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	125912843	125912906	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22411	8.07998	HepG2	PPIG
chr5	125903948	125904049	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.70290	7.52806	HepG2	G3BP1
chr5	125880542	125880643	-	3'-UTR,intron-Distal	3.52099	6.69112	HepG2	LARP4
chr5	125912767	125912843	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.43658	6.00907	HepG2	PPIG
chr5	125906468	125906540	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.03080	5.73400	HepG2	PPIG
chr5	125903989	125904042	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.45736	5.56491	HepG2	BCLAF1
chr5	125929123	125929191	-	CDS,intron-Distal,intron-Proximal	5.06661	5.51162	HepG2	U2AF2
chr5	125912850	125912906	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48030	5.28199	HepG2	GRWD1
chr5	125912766	125912850	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.17664	4.91614	HepG2	GRWD1
chr5	125903492	125903547	-	intron-Distal	3.90680	4.59145	HepG2	XPO5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 24 entries

eCLIP assay for ALDH7A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ALDH7A1 is not available on ENCORE database.
110 RBPs can affect the levels of ALDH7A1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ALDH7A1 is not available on ENCORE database.

110 RBPs can affect the gene expression of ALDH7A1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ALDH7A1	ENSG00000164904.11	6497.49040	3159.16820	1.04020	63.37560	61.78760	HepG2	SRSF1
ALDH7A1	ENSG00000164904.11	2214.72990	4588.61600	-1.05090	60.16620	58.61170	HepG2	SRFBP1
ALDH7A1	ENSG00000164904.11	1167.31630	2570.12380	-1.13860	52.03790	50.23410	HepG2	SRSF9
ALDH7A1	ENSG00000164904.11	1144.08720	2467.41570	-1.10880	47.57540	46.03050	HepG2	ZNF622
ALDH7A1	ENSG00000164904.11	2584.38530	4860.63520	-0.91130	39.65530	37.87870	HepG2	ETF1
ALDH7A1	ENSG00000164904.11	795.81750	2326.75450	-1.54780	39.49360	37.06010	HepG2	U2AF1
ALDH7A1	ENSG00000164904.11	1553.85840	3026.68170	-0.96190	38.38110	36.66100	HepG2	SF3B4
ALDH7A1	ENSG00000164904.11	1512.05390	2856.97900	-0.91800	34.90040	33.15730	HepG2	PCBP1
ALDH7A1	ENSG00000164904.11	2181.08530	3837.89030	-0.81530	26.38900	24.93680	HepG2	PUM1
ALDH7A1	ENSG00000164904.11	1601.42630	2652.29790	-0.72790	24.86490	23.45650	HepG2	ACO1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 110 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ALDH7A1 is not available on ENCORE database.

10 RBPs can affect the splicing of ALDH7A1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ALDH7A1	ENSG00000164904.11	chr5	-	125905631	125905701			125903950	125904048	125906473	125906551	0.06100	0.00000	0.00001	included	HepG2	U2AF1
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.07300	0.00000	0.00001	1included	HepG2	FTO
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.20300	0.00000	0.00010	1included	HepG2	DDX55
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.18900	0.00000	0.00039	1included	HepG2	SUPV3L1
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.17000	0.00001	0.00093	1included	HepG2	XRN2
SE	ALDH7A1	ENSG00000164904.11	chr5	-	125900149	125900284			125896774	125896816	125903950	125904048	0.09200	0.00003	0.01093	included	HepG2	HNRNPUL1
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.15100	0.00013	0.01127	1included	HepG2	BCCIP
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	-0.14700	0.00090	0.04202	2included	HepG2	DROSHA
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.13400	0.00115	0.04136	1included	HepG2	TAF15
MXE	ALDH7A1	ENSG00000164904.11	chr5	-	125918542	125918666	125919623	125919704	125912770	125912903	125928355	125928421	0.09800	0.00188	0.03880	1included	HepG2	SRSF1

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ALDH7A1

General Information

Functions

Localization

Domains (AlphaFold: ALDH7A1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ALDH7A1 is not avaliable on ENCORE database.

9 proteins are bound to ALDH7A1 RNA:

eCLIP assay for ALDH7A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ALDH7A1 is not available on ENCORE database.

110 RBPs can affect the gene expression of ALDH7A1 :

The Knockdown/knockout RNA-Seq assay for ALDH7A1 is not available on ENCORE database.

10 RBPs can affect the splicing of ALDH7A1 :

The Knockdown/knockout RNA-Seq assay for ALDH7A1 is not avaliable on ENCORE database.