ACADM

General Information

Gene Name : ACADM
Gene ID : ENSG00000117054.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACADM)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACADM	ENSG00000117054.13	212.09	154.93	183.51	ENCSR000AEF
HepG2	ACADM	ENSG00000117054.13	31.04	62.48	46.76	ENCSR985KAT
K562	ACADM	ENSG00000117054.13	105.71	86.33	96.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACADM is not avaliable on ENCORE database.

Proteins bound to RNA

ACADM RNA is bound by 32 proteins.

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eCLIP assay for ACADM is not avaliable on ENCORE database.

32 proteins are bound to ACADM RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	76252799	76252835	+	intron-Distal	5.12924	400.00000	K562	AATF
chr1	76252773	76252788	+	intron-Distal	4.47973	400.00000	HepG2	NOLC1
chr1	76252782	76252785	+	intron-Distal	5.32902	400.00000	K562	AATF
chr1	76252774	76252795	+	intron-Distal	3.92116	400.00000	HepG2	DKC1
chr1	76252795	76252799	+	intron-Distal	4.00124	400.00000	HepG2	DKC1
chr1	76252799	76252817	+	intron-Distal	4.01802	400.00000	HepG2	DKC1
chr1	76252759	76252787	+	intron-Distal	5.63362	400.00000	HepG2	NIP7
chr1	76252797	76252822	+	intron-Distal	4.82542	400.00000	HepG2	NOLC1
chr1	76252786	76252799	+	intron-Distal	5.00548	400.00000	K562	AATF
chr1	76252755	76252759	+	intron-Distal	6.63081	400.00000	HepG2	NIP7
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 77 entries

eCLIP assay for ACADM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACADM is not available on ENCORE database.
115 RBPs can affect the levels of ACADM.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACADM is not available on ENCORE database.

115 RBPs can affect the gene expression of ACADM :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACADM	ENSG00000117054.9	777.69780	2319.98860	-1.57680	53.84370	50.97030	K562	SRSF1
ACADM	ENSG00000117054.9	818.30790	2042.14180	-1.31940	43.99320	41.36770	HepG2	NOL12
ACADM	ENSG00000117054.9	1279.96060	2408.16260	-0.91180	33.20940	31.96870	HepG2	SRSF1
ACADM	ENSG00000117054.9	1981.14230	3113.94530	-0.65240	28.69960	26.70160	K562	NSUN2
ACADM	ENSG00000117054.9	1707.80590	3072.54180	-0.84730	26.55760	24.33250	K562	SF3A3
ACADM	ENSG00000117054.9	953.79980	2366.72240	-1.31110	22.71310	21.17410	HepG2	DDX6
ACADM	ENSG00000117054.9	1061.21800	2382.64670	-1.16680	22.13690	20.34200	HepG2	HNRNPK
ACADM	ENSG00000117054.9	1274.23390	2536.92160	-0.99340	15.67130	14.16440	HepG2	FXR1
ACADM	ENSG00000117054.9	1105.04880	2275.53190	-1.04210	15.29470	13.97130	HepG2	EIF2S1
ACADM	ENSG00000117054.9	777.14410	1255.70500	-0.69220	14.52290	13.37360	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 144 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACADM is not available on ENCORE database.

44 RBPs can affect the splicing of ACADM :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ACADM	ENSG00000117054.9	chr1	+	76194085	76194173	76190451	76190502	76198328	76198426	-0.70400	0.00000	excluded	K562	SRSF1
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198522	76198607	76200475	76200556	-0.53500	0.00000	excluded	K562	SRSF1
SE	ACADM	ENSG00000117054.9	chr1	+	76194085	76194173	76190451	76190502	76198328	76198426	-0.25700	0.00000	excluded	K562	SF3B4
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198522	76198607	76200475	76200556	-0.25700	0.00000	excluded	K562	SF3B4
SE	ACADM	ENSG00000117054.9	chr1	+	76252384	76252550	76251717	76251959	76253181	76253260	-0.10500	0.00000	excluded	HepG2	U2AF2
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198537	76198607	76200475	76200556	-0.08000	0.00005	excluded	K562	AQR
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198522	76198607	76200475	76200556	0.10600	0.00043	included	K562	FXR1
SE	ACADM	ENSG00000117054.9	chr1	+	76252384	76252482	76251717	76251959	76253181	76253260	-0.09700	0.00001	excluded	HepG2	DDX3X
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198522	76198607	76200475	76200556	-0.11200	0.00016	excluded	K562	PUS1
SE	ACADM	ENSG00000117054.9	chr1	+	76199212	76199313	76198522	76198607	76200475	76200556	-0.05800	0.00002	excluded	K562	LARP4

Showing 1 to 10 of 89 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACADM

General Information

Functions

Localization

Domains (AlphaFold: ACADM)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACADM is not avaliable on ENCORE database.

32 proteins are bound to ACADM RNA:

eCLIP assay for ACADM is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACADM is not available on ENCORE database.

115 RBPs can affect the gene expression of ACADM :

The Knockdown/knockout RNA-Seq assay for ACADM is not available on ENCORE database.

44 RBPs can affect the splicing of ACADM :

The Knockdown/knockout RNA-Seq assay for ACADM is not avaliable on ENCORE database.