ABCB10

General Information

Gene Name       : ABCB10
Gene ID             : ENSG00000135776.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ABCB10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ABCB10ENSG00000135776.417.3514.8116.08ENCSR000AEF
HepG2ABCB10ENSG00000135776.411.9122.5517.23ENCSR985KAT
K562ABCB10ENSG00000135776.423.4824.5124.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ABCB10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ABCB10 RNA is bound by 21 proteins.  







eCLIP assay for ABCB10 is not avaliable on ENCORE database.





21 proteins are bound to ABCB10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1229653591229653699-3'-UTR,intron-Distal3.601053.68079HepG2FUBP3
chr1229694203229694427-5'-UTR,CDS,intron-Distal4.1324933.84503HepG2DDX3X
chr1229684923229684982-CDS,intron-Distal,intron-Proximal4.325643.96990K562BUD13
chr1229694050229694352-CDS,intron-Distal3.866429.23955K562HNRNPM
chr1229676485229676499-CDS,intron-Distal3.228444.14323K562YBX3
chr1229676442229676471-CDS,intron-Distal3.138083.67697K562YBX3
chr1229654145229654195-CDS,intron-Distal3.662635.75231K562AQR
chr1229665908229665964-CDS,intron-Distal,intron-Proximal4.749335.93840HepG2PRPF8
chr1229667352229667478-CDS,intron-Distal,intron-Proximal5.726228.38577HepG2PRPF8
chr1229657342229657351-CDS,intron-Distal6.5045554.07073K562LIN28B
chr1229657337229657342-CDS,intron-Distal,intron-Proximal7.3572150.58030K562LIN28B
chr1229694030229694132-CDS,intron-Distal4.5455710.04678K562DHX30
chr1229654526229654589-CDS,intron-Distal,intron-Proximal4.339459.80019K562AQR
chr1229694247229694316-CDS,intron-Distal3.662305.57795K562DHX30
chr1229657366229657383-CDS,intron-Distal,intron-Proximal4.447365.48503HepG2LIN28B
chr1229657366229657383-CDS,intron-Distal,intron-Proximal5.4259323.85428K562LIN28B
chr1229684953229684993-CDS,intron-Distal,intron-Proximal4.772048.23899K562PRPF8
chr1229657351229657358-CDS,intron-Distal6.6308958.57883K562LIN28B
chr1229685136229685152-CDS,intron-Distal3.078987.22113K562YBX3
chr1229657358229657366-CDS,intron-Distal5.6297129.46746K562LIN28B
chr1229693993229694141-CDS,intron-Distal3.701324.36583K562XRN2
chr1229667345229667392-CDS,intron-Distal,intron-Proximal3.054953.94281K562PRPF8
chr1229677983229677988-CDS,intron-Distal,intron-Proximal3.117075.99226K562YBX3
chr1229661682229661749-CDS,intron-Distal,intron-Proximal6.4626926.27521K562LIN28B
chr1229693966229694042-CDS,intron-Distal4.434197.91734K562GEMIN5
chr1229684916229685027-CDS,intron-Distal,intron-Proximal4.680264.75655HepG2PRPF8
chr1229654128229654170-CDS,intron-Distal3.275873.75245K562BUD13
chr1229694256229694340-CDS,intron-Distal3.515434.60670K562FXR2
chr1229683283229683391-CDS,intron-Distal4.362915.16052K562RBM15
chr1229654602229654623-CDS,intron-Distal,intron-Proximal4.6546912.05221HepG2LIN28B
chr1229654598229654623-CDS,intron-Distal,intron-Proximal7.3773253.08680K562LIN28B
chr1229683180229683248-CDS,intron-Distal,intron-Proximal3.024094.60947K562AQR
chr1229685115229685136-CDS,intron-Distal3.137269.49523K562YBX3
chr1229667469229667561-CDS,intron-Distal,intron-Proximal3.4508312.88316K562SF3B4
chr1229654587229654598-CDS,intron-Distal,intron-Proximal3.201413.09884K562LIN28B
chr1229657337229657366-CDS,intron-Distal,intron-Proximal4.9770516.81475HepG2LIN28B
chr1229667449229667505-CDS,intron-Distal,intron-Proximal3.640726.23623K562GPKOW
chr1229661682229661719-CDS,intron-Distal,intron-Proximal4.297434.86776HepG2LIN28B
chr1229669253229669363-intron-Distal3.258717.81851K562KHSRP
chr1229669363229669440-intron-Distal4.2089414.53398K562KHSRP
chr1229676790229676872-intron-Distal6.1983614.44342K562QKI
chr1229676797229676850-intron-Distal3.521604.23286HepG2QKI
chr1229684885229684981-intron-Distal,intron-Proximal3.456638.23725K562AQR
chr1229689460229689539-intron-Distal3.927313.18711HepG2ILF3
chr1229679310229679389-intron-Distal3.564045.41630K562RBFOX2
chr1229669639229669687-intron-Distal3.299503.43875K562EXOSC5
chr1229657265229657336-intron-Distal,intron-Proximal4.784594.13847K562AQR
chr1229669440229669525-intron-Distal3.426146.17398K562KHSRP
chr1229679213229679278-intron-Distal4.953668.06678K562TARDBP
chr1229684941229684953-intron-Distal,intron-Proximal4.953187.13585K562PRPF8
chr1229664328229664433-intron-Distal3.474194.72639K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ABCB10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ABCB10 is not available on ENCORE database.

  • 117 RBPs can affect the levels of ABCB10.  








The Knockdown/knockout RNA-Seq assay for ABCB10 is not available on ENCORE database.





117 RBPs can affect the gene expression of ABCB10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ABCB10ENSG00000135776.4644.89590790.97710-0.294602.617802.02340HepG2ACO1
ABCB10ENSG00000135776.4658.972101127.19020-0.774407.101106.29230HepG2AKAP1
ABCB10ENSG00000135776.4566.88340794.67130-0.487305.629204.56960HepG2AKAP8L
ABCB10ENSG00000135776.4685.48900932.66960-0.444203.074702.24830HepG2ASCC1
ABCB10ENSG00000135776.4877.467601168.85210-0.413705.521304.60890HepG2AUH
ABCB10ENSG00000135776.4476.97620769.53030-0.690104.932203.67780HepG2BCCIP
ABCB10ENSG00000135776.4469.53010668.68310-0.510103.199102.23080HepG2BCLAF1
ABCB10ENSG00000135776.4255.82180434.51730-0.764305.867405.03470HepG2BOP1
ABCB10ENSG00000135776.4414.79670745.20800-0.845203.594702.46800HepG2CCAR1
ABCB10ENSG00000135776.4446.66960790.77880-0.8241015.4634014.15860HepG2CKAP4
ABCB10ENSG00000135776.4265.54730541.84920-1.028904.224003.27300HepG2CNOT7
ABCB10ENSG00000135776.4842.413101054.81430-0.324401.972001.41200HepG2CELF1
ABCB10ENSG00000135776.4179.65200573.20200-1.6738022.3604019.41940HepG2DDX28
ABCB10ENSG00000135776.4777.887601079.79370-0.473103.469002.77840HepG2DDX3X
ABCB10ENSG00000135776.4507.84600756.59700-0.575103.631802.75950HepG2DDX55
ABCB10ENSG00000135776.4611.39360927.49270-0.601204.420003.65360HepG2DDX6
ABCB10ENSG00000135776.4157.84890575.21260-1.8656038.2458036.02300HepG2DNAJC21
ABCB10ENSG00000135776.4368.33450570.10900-0.630207.963906.93010HepG2DNAJC2
ABCB10ENSG00000135776.4423.31740891.69310-1.0748013.3334012.09990HepG2EIF2S1
ABCB10ENSG00000135776.4280.84400424.42530-0.595702.479501.61900HepG2EIF3D
ABCB10ENSG00000135776.4788.50510591.553100.414503.334602.16380HepG2EIF3G
ABCB10ENSG00000135776.4711.57790959.41770-0.431102.185701.57150HepG2EIF4B
ABCB10ENSG00000135776.4363.46910596.98870-0.715906.900105.24080HepG2FASTKD2
ABCB10ENSG00000135776.4717.86220994.18310-0.469803.452402.68490HepG2FXR1
ABCB10ENSG00000135776.4630.57470922.30590-0.548604.124303.32110HepG2G3BP1
ABCB10ENSG00000135776.41269.52850979.073700.374702.620201.75510HepG2G3BP2
ABCB10ENSG00000135776.4262.38120377.90730-0.526402.532401.67910HepG2GEMIN5
ABCB10ENSG00000135776.4614.27460755.14070-0.297902.456901.52970HepG2HDGF
ABCB10ENSG00000135776.4261.71550580.72300-1.1499013.7043012.43790HepG2HNRNPA1
ABCB10ENSG00000135776.4487.55330625.00080-0.358302.800302.07890HepG2HNRNPF
ABCB10ENSG00000135776.4632.989601033.46770-0.707208.928507.78450HepG2HNRNPL
ABCB10ENSG00000135776.4516.91520641.66900-0.311902.446201.87410HepG2HNRNPU
ABCB10ENSG00000135776.4531.98210879.74610-0.725702.895701.89000HepG2IGF2BP3
ABCB10ENSG00000135776.4413.01950655.44500-0.6663010.040008.73190HepG2ILF2
ABCB10ENSG00000135776.4601.44770723.03580-0.265602.223801.30720HepG2KIF1C
ABCB10ENSG00000135776.4282.94590444.22670-0.650802.786901.73140HepG2METAP2
ABCB10ENSG00000135776.4351.78500499.41680-0.505603.047402.19860HepG2MSI2
ABCB10ENSG00000135776.4171.94460440.11360-1.355909.977808.10930HepG2MTPAP
ABCB10ENSG00000135776.4693.954001023.68530-0.560904.421503.62860HepG2NCBP2
ABCB10ENSG00000135776.4920.065701124.89630-0.290002.305501.60950HepG2NOL12
ABCB10ENSG00000135776.4456.68890694.69650-0.605202.614401.55340HepG2NONO
ABCB10ENSG00000135776.4215.26830548.17920-1.348504.574002.16400HepG2NUFIP2
ABCB10ENSG00000135776.4453.91020635.15250-0.484704.733503.65940HepG2PARN
ABCB10ENSG00000135776.4604.01660881.57200-0.545507.343806.43270HepG2PCBP1
ABCB10ENSG00000135776.4256.49680350.98210-0.452502.475801.31760HepG2PKM
ABCB10ENSG00000135776.4698.32380456.628300.612807.678806.46890HepG2PRPF4
ABCB10ENSG00000135776.4278.70820583.71510-1.0665010.430608.99250HepG2PRPF8
ABCB10ENSG00000135776.4663.11040897.01430-0.435904.605203.93900HepG2PTBP1
ABCB10ENSG00000135776.4882.584401073.74050-0.282802.191101.65220HepG2PUF60
ABCB10ENSG00000135776.4847.504301139.73930-0.427404.910104.16610HepG2PUM1
ABCB10ENSG00000135776.4876.634201138.95880-0.377703.908903.11440HepG2PUM2
ABCB10ENSG00000135776.4682.96040805.65760-0.238401.896601.36700HepG2PUS1
ABCB10ENSG00000135776.4486.13160673.88390-0.471204.021203.00930HepG2RBM15
ABCB10ENSG00000135776.4884.697001121.66430-0.342403.408302.85040HepG2RBM22
ABCB10ENSG00000135776.41110.97960929.758800.256802.215901.65710HepG2RECQL
ABCB10ENSG00000135776.4411.93860673.24870-0.708706.860205.85480HepG2RPLP0
ABCB10ENSG00000135776.4215.42280412.94840-0.938808.035107.05110HepG2RPS19
ABCB10ENSG00000135776.4612.90590822.24400-0.423902.674701.88690HepG2RPS2
ABCB10ENSG00000135776.4341.04220577.42110-0.759705.400104.33590HepG2RRP9
ABCB10ENSG00000135776.4293.43760414.51510-0.498402.628301.71290HepG2SERBP1
ABCB10ENSG00000135776.4229.53100517.41940-1.172603.387001.74370HepG2SFPQ
ABCB10ENSG00000135776.4867.172001029.37800-0.247402.273001.62700HepG2SLBP
ABCB10ENSG00000135776.4456.83180666.40280-0.544706.923405.97680HepG2SMN1
ABCB10ENSG00000135776.4510.84540736.71090-0.528203.077202.06290HepG2SMNDC1
ABCB10ENSG00000135776.4489.09550703.13820-0.523703.036001.36870HepG2SND1
ABCB10ENSG00000135776.4328.24210475.26700-0.534002.232901.53450HepG2SNRNP70
ABCB10ENSG00000135776.4886.760001266.87750-0.514708.183807.44790HepG2SRFBP1
ABCB10ENSG00000135776.41268.33930974.818100.379604.530203.96230HepG2SRSF1
ABCB10ENSG00000135776.4257.05280459.60260-0.838305.288903.86320HepG2SRSF3
ABCB10ENSG00000135776.4864.588701060.06210-0.294102.893402.25390HepG2SRSF5
ABCB10ENSG00000135776.4411.97240614.03560-0.575806.225205.24790HepG2SRSF7
ABCB10ENSG00000135776.41344.000601099.947800.289003.255202.70960HepG2SSB
ABCB10ENSG00000135776.4369.02220504.85340-0.452202.317801.39920HepG2TFIP11
ABCB10ENSG00000135776.4373.66170623.53150-0.738708.248807.46890HepG2TIAL1
ABCB10ENSG00000135776.4198.41870629.07300-1.6647038.9107037.10160HepG2TRIM56
ABCB10ENSG00000135776.4306.43740554.22610-0.854902.242801.36460HepG2U2AF2
ABCB10ENSG00000135776.4299.48130444.94970-0.571203.477802.63090HepG2UCHL5
ABCB10ENSG00000135776.4305.19840680.55470-1.1570022.7106021.09090HepG2UPF1
ABCB10ENSG00000135776.4319.20090657.05140-1.0415016.9941015.69710HepG2UTP3
ABCB10ENSG00000135776.4508.46240741.44080-0.544203.642102.81930HepG2XRN2
ABCB10ENSG00000135776.42031.386402802.33940-0.464207.904206.24020K562ATP5C1
ABCB10ENSG00000135776.4513.88050729.11940-0.504702.751701.70200K562CCAR1
ABCB10ENSG00000135776.42573.188703067.48600-0.253502.472801.37130K562CCDC124
ABCB10ENSG00000135776.41657.511502263.49200-0.449507.574805.71910K562CPEB4
ABCB10ENSG00000135776.49502.184504635.453601.0354039.9490037.01250K562CELF1
ABCB10ENSG00000135776.42760.445402287.817200.270803.024401.75790K562DDX21
ABCB10ENSG00000135776.41051.334402397.67970-1.1894024.8483021.08310K562DDX28
ABCB10ENSG00000135776.41103.789701834.14590-0.732606.743305.02850K562DDX3X
ABCB10ENSG00000135776.43338.163402322.830300.523104.293502.66530K562EEF2
ABCB10ENSG00000135776.41311.882202244.12150-0.7745011.754109.72570K562EFTUD2
ABCB10ENSG00000135776.41378.098802837.49860-1.0419016.3452014.81120K562EIF2S2
ABCB10ENSG00000135776.41588.904502402.45590-0.596505.906504.31210K562EIF3D
ABCB10ENSG00000135776.41350.346501916.30280-0.505005.399704.25510K562EIF4A3
ABCB10ENSG00000135776.44795.119403770.326600.346806.497905.08020K562EIF4G2
ABCB10ENSG00000135776.41468.064601997.98990-0.444603.375401.44490K562FAM120A
ABCB10ENSG00000135776.4746.564401263.26940-0.758808.110706.59770K562FMR1
ABCB10ENSG00000135776.4826.176801070.81520-0.374202.444001.58740K562FTO
ABCB10ENSG00000135776.42485.862301923.022600.370302.206201.58540K562G3BP2
ABCB10ENSG00000135776.43088.719201654.240300.9007027.3464024.45900K562GLRX3
ABCB10ENSG00000135776.43863.611602694.684800.519702.699701.64090K562HNRNPA1
ABCB10ENSG00000135776.41047.473301582.27420-0.595107.977907.01230K562HNRNPC
ABCB10ENSG00000135776.41081.637301413.12270-0.385703.603602.28360K562HNRNPF
ABCB10ENSG00000135776.41625.001802531.12990-0.639309.466507.10390K562IGF2BP3
ABCB10ENSG00000135776.41164.96240761.685700.612905.627503.49680K562ILF3
ABCB10ENSG00000135776.41147.442801532.67520-0.417604.087202.34550K562LARP7
ABCB10ENSG00000135776.4910.831801411.23420-0.631707.964205.28380K562LSM11
ABCB10ENSG00000135776.42065.727602615.56480-0.340503.417302.47800K562MAGOH
ABCB10ENSG00000135776.43908.185102610.326800.582209.934308.07970K562MATR3
ABCB10ENSG00000135776.42402.769303175.32140-0.402204.839003.57190K562MBNL1
ABCB10ENSG00000135776.42168.784601739.212700.318404.846103.79820K562MTPAP
ABCB10ENSG00000135776.41289.780401913.44380-0.569006.377504.53680K562NCBP2
ABCB10ENSG00000135776.42861.433601932.451200.5662020.5144018.75670K562NSUN2
ABCB10ENSG00000135776.41049.561901558.13050-0.570005.228603.04460K562NUSAP1
ABCB10ENSG00000135776.42053.980802556.49540-0.315703.283801.80490K562PCBP1
ABCB10ENSG00000135776.41546.510502327.28680-0.589608.165106.44800K562PCBP2
ABCB10ENSG00000135776.42867.531801950.448600.555903.646302.68930K562PCBP3
ABCB10ENSG00000135776.41144.494501544.90610-0.432804.281202.44980K562PHF6
ABCB10ENSG00000135776.41946.418502952.37460-0.601103.186201.50490K562PKM
ABCB10ENSG00000135776.42134.648101496.047500.512707.296306.01090K562POLR2G
ABCB10ENSG00000135776.41345.745902183.79670-0.698409.692308.28220K562PRPF8
ABCB10ENSG00000135776.4705.236801418.71630-1.0084017.6048014.91630K562PSIP1
ABCB10ENSG00000135776.41881.261102541.15150-0.433805.605604.68920K562PTBP1
ABCB10ENSG00000135776.43163.276504113.76930-0.379003.739902.79470K562PUF60
ABCB10ENSG00000135776.43070.823204287.27690-0.481409.626107.80940K562PUM2
ABCB10ENSG00000135776.41681.160502648.82600-0.655909.104708.16850K562PUS1
ABCB10ENSG00000135776.41715.790502375.33070-0.469304.679502.71810K562RBM34
ABCB10ENSG00000135776.41284.538202224.21170-0.792009.596408.05990K562RPS19
ABCB10ENSG00000135776.41064.091001382.66860-0.377802.635301.66000K562RPS3
ABCB10ENSG00000135776.44226.957102232.590200.9208010.996408.47970K562RRP9
ABCB10ENSG00000135776.42354.589701575.449900.579605.453202.92910K562SAFB2
ABCB10ENSG00000135776.4597.392701703.51440-1.511809.403906.81280K562SF1
ABCB10ENSG00000135776.4853.858401227.22120-0.523305.218003.68130K562SRFBP1
ABCB10ENSG00000135776.42710.388401953.545500.4723011.333109.59580K562SRPK2
ABCB10ENSG00000135776.41700.678202491.12530-0.550708.307407.09060K562SRSF1
ABCB10ENSG00000135776.42701.401201969.003300.456107.692605.44960K562SSB
ABCB10ENSG00000135776.41940.061702521.28980-0.378103.332102.55340K562TARDBP
ABCB10ENSG00000135776.41883.371302432.04030-0.368804.319403.26340K562TIA1
ABCB10ENSG00000135776.4994.690601449.87500-0.543606.068904.54670K562TRIM56
ABCB10ENSG00000135776.41293.906401864.04660-0.526704.628803.13940K562U2AF1
ABCB10ENSG00000135776.41513.014801925.15030-0.347503.815602.87280K562U2AF2
ABCB10ENSG00000135776.41471.642902049.01660-0.477509.645008.40310K562UPF1
ABCB10ENSG00000135776.42735.165101823.184100.5851017.2535015.40140K562WDR43
ABCB10ENSG00000135776.45511.328104298.084500.358603.876902.82430K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ABCB10 is not available on ENCORE database.





9 RBPs can affect the splicing of ABCB10 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEABCB10ENSG00000135776.4chr1-229667382229667478229665945229666155229675202229675338-0.144000.000000.00010excludedK562SF3B4
SEABCB10ENSG00000135776.4chr1-2296745602296746542296673822296674782296752022296753380.051000.000510.02227includedK562PRPF8
SEABCB10ENSG00000135776.4chr1-229657338229657382229654587229654622229661682229661863-0.069000.003330.07760excludedK562AKAP8L
SEABCB10ENSG00000135776.4chr1-229667382229667478229665945229666155229675202229675338-0.067000.004350.06484excludedK562U2AF2
SEABCB10ENSG00000135776.4chr1-229667382229667478229665945229666155229675202229675338-0.075000.000130.00925excludedK562HNRNPK
SEABCB10ENSG00000135776.4chr1-2296745602296746542296673822296674782296752022296753380.104000.000170.01542includedHepG2SRSF9
A3SSABCB10ENSG00000135776.4chr1-2296673822296675652296673822296674782296752022296753380.069000.000000.00001longerK562AGGF1
A3SSABCB10ENSG00000135776.4chr1-2296673822296675652296673822296674782296752022296753380.065000.000000.00010longerK562PUS1
MXEABCB10ENSG00000135776.4chr1-229657338229657382229661682229661863229654587229654622229662975229663055-0.112000.003030.023622includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ABCB10 is not avaliable on ENCORE database.