ZNF136

General Information

Gene Name       : ZNF136
Gene ID             : ENSG00000196646.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF136)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF136ENSG00000196646.115.044.514.78ENCSR000AEF
HepG2ZNF136ENSG00000196646.113.204.053.62ENCSR985KAT
K562ZNF136ENSG00000196646.112.452.092.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF136 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF136 RNA is bound by 1 proteins.  







eCLIP assay for ZNF136 is not avaliable on ENCORE database.





1 proteins are bound to ZNF136 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191229978012300034+3'-UTR4.583285.68841K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF136 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF136 is not available on ENCORE database.

  • 28 RBPs can affect the levels of ZNF136.  








The Knockdown/knockout RNA-Seq assay for ZNF136 is not available on ENCORE database.





28 RBPs can affect the gene expression of ZNF136 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF136ENSG00000196646.7143.75160210.94770-0.553302.055401.37430HepG2ASCC1
ZNF136ENSG00000196646.7430.55480256.940900.744706.251005.54810HepG2RBM22
ZNF136ENSG00000196646.7268.27190169.444700.662802.812902.13380HepG2SF3A3
ZNF136ENSG00000196646.7332.40550251.948500.399702.256801.78310HepG2SSB
ZNF136ENSG00000196646.787.01420125.66140-0.530201.802101.32750HepG2TRIM56
ZNF136ENSG00000196646.7224.12580115.314400.958604.911104.08750HepG2U2AF1
ZNF136ENSG00000196646.7118.34760185.31620-0.647002.377901.37060HepG2XPO5
ZNF136ENSG00000196646.71448.50550278.922802.3765068.8512066.29650K562AQR
ZNF136ENSG00000196646.7497.01220380.754900.384302.628901.67860K562CELF1
ZNF136ENSG00000196646.775.26720122.93680-0.707802.516101.52370K562DDX3X
ZNF136ENSG00000196646.7239.55200174.040700.460802.305301.70170K562DDX47
ZNF136ENSG00000196646.7203.58870123.974800.715503.317601.45120K562DDX51
ZNF136ENSG00000196646.7207.40310118.848900.803203.549802.08240K562EEF2
ZNF136ENSG00000196646.7198.14480114.862500.786503.894202.79740K562EFTUD2
ZNF136ENSG00000196646.7238.89560123.035400.957205.374803.87150K562EIF3D
ZNF136ENSG00000196646.7409.45370309.759100.402502.816201.87110K562EIF4G2
ZNF136ENSG00000196646.7206.88080133.561100.631202.941602.32030K562FXR1
ZNF136ENSG00000196646.7178.97480114.303600.646802.850601.69330K562GLRX3
ZNF136ENSG00000196646.7175.4898091.216500.943904.385603.65100K562HNRNPC
ZNF136ENSG00000196646.7270.39540169.559200.673203.347401.97230K562HNRNPK
ZNF136ENSG00000196646.7259.05080158.742800.706403.703802.57390K562PCBP2
ZNF136ENSG00000196646.7206.16790111.773100.883104.293103.35970K562PRPF8
ZNF136ENSG00000196646.7672.67560337.986000.9928011.7790010.08720K562PUF60
ZNF136ENSG00000196646.7137.5621074.598400.882803.552202.43010K562RCC2
ZNF136ENSG00000196646.7195.97010134.970400.537902.288301.42820K562SRPK2
ZNF136ENSG00000196646.7214.85880134.766700.672802.891401.77040K562U2AF1
ZNF136ENSG00000196646.7270.18710139.187300.956807.361306.05720K562U2AF2
ZNF136ENSG00000196646.7191.25740121.160500.658502.342901.53640K562WDR3
ZNF136ENSG00000196646.7202.21460125.976000.682603.662402.69830K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF136 is not available on ENCORE database.





4 RBPs can affect the splicing of ZNF136 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF136ENSG00000196646.7chr19+1229659912296726122738781227402112296928122969720.248000.008030.06821includedK562AQR
SEZNF136ENSG00000196646.7chr19+122965991229672612273878122740211229692812296989-0.361000.000160.05172excludedK562PPIL4
SEZNF136ENSG00000196646.7chr19+122965991229672612273878122740211229692812296989-0.461000.001560.04767excludedK562UTP18
SEZNF136ENSG00000196646.7chr19+122965991229672612273878122740211229692812296989-0.679000.000000.00001excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF136 is not avaliable on ENCORE database.