SPRYD7

General Information

Gene Name       : SPRYD7
Gene ID             : ENSG00000123178.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SPRYD7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SPRYD7ENSG00000123178.147.286.987.13ENCSR000AEF
HepG2SPRYD7ENSG00000123178.143.865.584.72ENCSR985KAT
K562SPRYD7ENSG00000123178.146.337.386.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SPRYD7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SPRYD7 RNA is bound by 3 proteins.  







eCLIP assay for SPRYD7 is not avaliable on ENCORE database.





3 proteins are bound to SPRYD7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135048801050488088-3'-UTR,intron-Distal3.595144.50550K562UPF1
chr135051027950510450-5'-UTR,CDS,intron-Distal4.103738.56326K562DDX3X
chr135051028850510366-CDS,intron-Distal3.928103.01428K562UCHL5
chr135050205050502222-CDS,intron-Distal,intron-Proximal4.294784.42734K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SPRYD7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SPRYD7 is not available on ENCORE database.

  • 34 RBPs can affect the levels of SPRYD7.  








The Knockdown/knockout RNA-Seq assay for SPRYD7 is not available on ENCORE database.





34 RBPs can affect the gene expression of SPRYD7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SPRYD7ENSG00000123178.10534.33330321.665500.732104.638103.97190HepG2AKAP1
SPRYD7ENSG00000123178.10154.39540266.12740-0.785504.201003.24230HepG2ASCC1
SPRYD7ENSG00000123178.10354.99780211.193800.749105.641604.59180HepG2CALR
SPRYD7ENSG00000123178.10291.12820171.604700.762504.718203.85850HepG2DDX21
SPRYD7ENSG00000123178.10516.72900308.080200.746005.341304.49760HepG2DDX3X
SPRYD7ENSG00000123178.10225.26610150.352100.583202.567301.31640HepG2DDX47
SPRYD7ENSG00000123178.10382.68370281.093200.445001.950001.40960HepG2EIF4A3
SPRYD7ENSG00000123178.10135.77740266.68890-0.973904.961604.04720HepG2HNRNPK
SPRYD7ENSG00000123178.10420.98630283.885600.568403.155402.45530HepG2MAGOH
SPRYD7ENSG00000123178.10292.51630191.523400.610903.263402.38800HepG2MSI2
SPRYD7ENSG00000123178.10400.34010292.146900.454402.099601.54440HepG2NCBP2
SPRYD7ENSG00000123178.10100.22630163.46200-0.705702.363101.61380HepG2PRPF8
SPRYD7ENSG00000123178.10205.41060301.87220-0.555403.943903.26330HepG2PUM1
SPRYD7ENSG00000123178.10297.86350199.061200.581303.904703.19750HepG2PUS1
SPRYD7ENSG00000123178.10331.62140206.634400.682402.551401.87400HepG2RAVER1
SPRYD7ENSG00000123178.10209.33920327.53670-0.645802.574501.82170HepG2SNRNP70
SPRYD7ENSG00000123178.10493.56380289.092100.771607.904807.20110HepG2SRSF1
SPRYD7ENSG00000123178.10196.89350280.77140-0.512002.975502.32800HepG2SRSF5
SPRYD7ENSG00000123178.10131.79940235.18490-0.835505.880005.12960HepG2SRSF9
SPRYD7ENSG00000123178.10277.64980160.268100.792705.245504.60200HepG2TIAL1
SPRYD7ENSG00000123178.10182.76630277.80940-0.604103.257002.30180HepG2TUFM
SPRYD7ENSG00000123178.10353.18020202.425000.802905.165604.32250HepG2U2AF1
SPRYD7ENSG00000123178.10157.24740224.30170-0.512402.425401.43330HepG2UTP18
SPRYD7ENSG00000123178.10370.88230240.000900.627805.489304.78600HepG2ZNF622
SPRYD7ENSG00000123178.10369.70880526.85930-0.511002.825802.23210K562AQR
SPRYD7ENSG00000123178.10312.79910463.96750-0.568802.354001.38830K562CNOT7
SPRYD7ENSG00000123178.10204.32640337.12340-0.722403.361902.49480K562CPSF6
SPRYD7ENSG00000123178.10670.96370485.326300.467204.525803.71930K562DDX47
SPRYD7ENSG00000123178.10239.34480139.674900.776902.676701.69130K562EIF3A
SPRYD7ENSG00000123178.10367.60480268.948400.450701.888501.31680K562G3BP2
SPRYD7ENSG00000123178.10216.61160334.72050-0.627804.183302.86390K562HNRNPA1
SPRYD7ENSG00000123178.10238.04080339.64420-0.512802.895302.03130K562RBM22
SPRYD7ENSG00000123178.10333.12090219.643200.600802.721701.91290K562RPS19
SPRYD7ENSG00000123178.10267.88410390.13350-0.542403.782802.83750K562SF3A3
SPRYD7ENSG00000123178.10293.21310373.02410-0.347302.111101.36450K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SPRYD7 is not available on ENCORE database.





2 RBPs can affect the splicing of SPRYD7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESPRYD7ENSG00000123178.10chr13-5050515350505270505020575050222150510265505104760.171000.000110.03487includedK562METAP2
SESPRYD7ENSG00000123178.10chr13-5050515350505270505020545050222150510265505104760.147000.001050.09880includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SPRYD7 is not avaliable on ENCORE database.