SLC12A8

General Information

Gene Name : SLC12A8
Gene ID : ENSG00000221955.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC12A8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC12A8	ENSG00000221955.10	37.33	42.57	39.95	ENCSR000AEF
HepG2	SLC12A8	ENSG00000221955.10	0.26	0.12	0.19	ENCSR985KAT
K562	SLC12A8	ENSG00000221955.10	0.17	0.03	0.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLC12A8 is not avaliable on ENCORE database.

Proteins bound to RNA

SLC12A8 RNA is bound by 13 proteins.

eCLIP assay for SLC12A8 is not avaliable on ENCORE database.

13 proteins are bound to SLC12A8 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	124997965	124998090	-	CDS,intron-Distal,intron-Proximal	3.91812	8.08603	HepG2	BCLAF1
chr3	124996532	124996649	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17027	3.60157	HepG2	GRWD1
chr3	124988177	124988224	-	intron-Distal	3.08302	3.64681	K562	EXOSC5
chr3	124986166	124986202	-	intron-Distal	5.72941	10.67022	K562	EXOSC5
chr3	124985885	124985919	-	intron-Distal	4.74615	9.10527	K562	EXOSC5
chr3	124980284	124980345	-	intron-Distal	4.30632	5.41154	K562	HNRNPL
chr3	124986646	124986710	-	intron-Distal	4.55238	5.37406	HepG2	HNRNPM
chr3	124986052	124986113	-	intron-Distal	4.68394	4.59137	HepG2	EXOSC5
chr3	124953014	124953079	-	CDS,intron-Distal,intron-Proximal	4.16280	6.23016	HepG2	PRPF8
chr3	124985129	124985179	-	intron-Distal	4.56198	10.29529	K562	EXOSC5
chr3	124953050	124953143	-	CDS,intron-Distal,intron-Proximal	3.68784	4.51739	HepG2	BCLAF1
chr3	124986662	124986758	-	intron-Distal	3.46575	4.33009	HepG2	SUGP2
chr3	124985984	124986009	-	intron-Distal	4.84480	6.73640	K562	EXOSC5
chr3	124988032	124988052	-	intron-Distal	4.37550	3.89080	K562	EXOSC5
chr3	124986065	124986109	-	intron-Distal	5.23673	26.45315	K562	EXOSC5
chr3	124968838	124968895	-	intron-Distal	4.95577	7.94700	HepG2	QKI
chr3	124970555	124970649	-	intron-Distal	4.30273	3.98095	HepG2	HNRNPL
chr3	124947477	124947545	-	3'-UTR,intron-Distal	4.80857	5.29571	HepG2	FUBP3
chr3	124980276	124980391	-	intron-Distal	5.09575	14.38142	HepG2	HNRNPL
chr3	124986446	124986528	-	intron-Distal	4.34370	3.78162	K562	HNRNPM
chr3	124945967	124946076	-	3'-UTR,intron-Distal	5.28874	6.43721	K562	PUM2
chr3	124947460	124947579	-	3'-UTR,intron-Distal	3.20730	3.93901	K562	KHSRP
chr3	124997827	124997966	-	intron-Distal,intron-Proximal	3.14810	3.73266	K562	KHSRP
chr3	124987613	124987673	-	intron-Distal	4.40302	13.67925	K562	EXOSC5
chr3	124965079	124965196	-	intron-Distal	3.91809	3.49011	K562	KHSRP
chr3	124968895	124968959	-	intron-Distal	6.22379	19.72417	HepG2	QKI
chr3	124986274	124986289	-	intron-Distal	5.24326	8.04096	K562	EXOSC5
chr3	124986452	124986508	-	intron-Distal	4.57915	5.68226	HepG2	HNRNPM
chr3	124968880	124968961	-	intron-Distal	5.21910	6.75921	K562	QKI
chr3	124952319	124952385	-	CDS,intron-Distal	3.76412	4.17155	HepG2	BCLAF1
chr3	124951531	124951673	-	CDS,intron-Distal	4.00703	3.73296	HepG2	IGF2BP1
chr3	124944932	124945067	-	3'-UTR,intron-Distal	3.93103	4.10688	K562	KHSRP
chr3	124986235	124986274	-	intron-Distal	6.13098	17.99505	K562	EXOSC5
chr3	124986735	124986814	-	intron-Distal	4.91146	18.63259	K562	EXOSC5
chr3	124984981	124985110	-	intron-Distal	4.62716	5.02084	HepG2	HNRNPM
chr3	124951077	124951165	-	3'-UTR,intron-Distal,intron-Proximal	5.60879	9.99898	K562	PUM2
chr3	124986347	124986383	-	intron-Distal	5.27918	9.02435	K562	EXOSC5
chr3	124985837	124985885	-	intron-Distal	4.66798	22.12059	K562	EXOSC5
chr3	124965032	124965124	-	intron-Distal	3.17349	3.69143	HepG2	CSTF2
chr3	124985204	124985238	-	intron-Distal	4.19164	7.91454	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for SLC12A8 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for SLC12A8 is not available on ENCORE database.
18 RBPs can affect the levels of SLC12A8.

The Knockdown/knockout RNA-Seq assay for SLC12A8 is not available on ENCORE database.

18 RBPs can affect the gene expression of SLC12A8 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC12A8	ENSG00000221955.6	22.13170	1.15940	4.25450	3.28270	2.44350	HepG2	CNOT7
SLC12A8	ENSG00000221955.6	23.85770	4.13380	2.52880	3.11100	2.38710	HepG2	CPSF6
SLC12A8	ENSG00000221955.6	124.05930	4.68370	4.72710	21.55890	19.77170	HepG2	RAVER1
SLC12A8	ENSG00000221955.6	81.73860	10.28590	2.99030	11.69690	10.78550	HepG2	RBM22
SLC12A8	ENSG00000221955.6	32.22770	11.61530	1.47220	1.92390	1.48320	HepG2	SRFBP1
SLC12A8	ENSG00000221955.6	19.91580	4.36210	2.19070	2.23400	1.57300	HepG2	TARDBP
SLC12A8	ENSG00000221955.6	3.14700	28.06880	-3.15690	4.31590	3.63420	K562	AGGF1
SLC12A8	ENSG00000221955.6	6.01930	29.20750	-2.27870	3.30570	2.59010	K562	AKAP8L
SLC12A8	ENSG00000221955.6	35.71460	3.10520	3.52370	6.04330	5.23350	K562	AQR
SLC12A8	ENSG00000221955.6	6.89560	30.64700	-2.15200	3.42160	2.39680	K562	ATP5C1
SLC12A8	ENSG00000221955.6	9.99940	33.54160	-1.74600	2.83650	1.64310	K562	CCDC124
SLC12A8	ENSG00000221955.6	20.50370	2.71580	2.91630	2.86500	1.77970	K562	CNOT7
SLC12A8	ENSG00000221955.6	19.14380	2.99540	2.67600	2.63730	1.87010	K562	CPSF6
SLC12A8	ENSG00000221955.6	27.57070	2.85940	3.26930	4.44700	3.44690	K562	GPKOW
SLC12A8	ENSG00000221955.6	26.15100	2.44280	3.42020	4.20130	3.02770	K562	KRR1
SLC12A8	ENSG00000221955.6	22.35610	6.44220	1.79490	2.11530	1.45310	K562	NSUN2
SLC12A8	ENSG00000221955.6	10.48950	28.96110	-1.46520	1.94630	1.47570	K562	PUS1
SLC12A8	ENSG00000221955.6	8.11140	28.22220	-1.79880	2.35290	1.79880	K562	RBM15
SLC12A8	ENSG00000221955.6	20.19990	2.83490	2.83290	2.90150	1.85330	K562	UCHL5
SLC12A8	ENSG00000221955.6	46.56510	3.49460	3.73590	9.93900	8.18800	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC12A8

General Information

Functions

Localization

Domains (AlphaFold: SLC12A8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC12A8 is not avaliable on ENCORE database.

13 proteins are bound to SLC12A8 RNA:

eCLIP assay for SLC12A8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC12A8 is not available on ENCORE database.

18 RBPs can affect the gene expression of SLC12A8 :

The Knockdown/knockout RNA-Seq assay for SLC12A8 is not available on ENCORE database.

No RBPs affect the alternative splcing events of SLC12A8 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for SLC12A8 is not avaliable on ENCORE database.