RP11-447L10.1

General Information

Gene Name : RP11-447L10.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-447L10.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-447L10.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-447L10.1 RNA is bound by 19 proteins.

eCLIP assay for RP11-447L10.1 is not avaliable on ENCORE database.

19 proteins are bound to RP11-447L10.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	195984717	195984760	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.03031	3.12746	HepG2	GRWD1
chr3	195984716	195984760	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.43928	8.80307	K562	UCHL5
chr3	195997282	195997316	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.86048	3.86058	K562	GRWD1
chr3	195984725	195984759	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.31961	6.36421	K562	ZNF622
chr3	195997282	195997331	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.16528	3.31827	HepG2	GRWD1
chr3	195997283	195997323	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.56443	8.43531	K562	ZNF622
chr3	195984724	195984760	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.56810	9.05563	HepG2	PPIG
chr3	195975068	195975164	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.63681	5.10069	HepG2	GRWD1
chr3	195997265	195997393	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.40227	6.20035	HepG2	BCLAF1
chr3	195997284	195997328	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.44662	8.45427	K562	UCHL5
chr3	196045072	196045153	-	5'-UTR,intron-Distal,intron-Proximal	3.94995	3.31905	K562	NONO
chr3	196043779	196043824	-	intron-Distal	4.57638	4.07596	K562	GTF2F1
chr3	196043972	196044011	-	intron-Distal	5.27326	25.64927	K562	AGGF1
chr3	196044732	196044811	-	intron-Distal	3.31367	4.23595	K562	AKAP8L
chr3	196043658	196043685	-	intron-Distal	6.56578	25.94945	HepG2	HNRNPL
chr3	196044149	196044193	-	intron-Distal	5.68080	13.73667	K562	HNRNPL
chr3	196014436	196014534	-	5'-UTR,intron-Distal	4.13557	8.78209	HepG2	PRPF8
chr3	196044618	196044671	-	intron-Distal	4.89391	25.61916	K562	AGGF1
chr3	196044036	196044079	-	intron-Distal	4.90033	11.42320	HepG2	HNRNPL
chr3	196044733	196044790	-	intron-Distal	4.09194	4.32762	K562	GEMIN5
chr3	196043761	196043827	-	intron-Distal	6.12488	42.75942	K562	HNRNPL
chr3	196044829	196044888	-	intron-Distal	4.30785	3.08079	HepG2	AGGF1
chr3	196044713	196044816	-	intron-Distal	4.06064	3.70701	HepG2	PRPF4
chr3	196043765	196043828	-	intron-Distal	5.68285	55.19268	K562	AGGF1
chr3	196044556	196044618	-	intron-Distal	5.29606	31.03421	K562	AGGF1
chr3	196044840	196044898	-	intron-Distal	3.74536	3.14687	K562	CSTF2T
chr3	196043685	196043708	-	intron-Distal	6.46477	23.99670	HepG2	HNRNPL
chr3	195977966	195978014	-	intron-Distal	6.04123	8.47410	K562	DROSHA
chr3	196044437	196044472	-	intron-Distal	6.25183	18.94406	K562	AGGF1
chr3	196044558	196044613	-	intron-Distal	4.91512	8.39842	K562	HNRNPL
chr3	196013340	196013454	-	intron-Distal	3.27207	4.52210	K562	KHSRP
chr3	196043657	196043709	-	intron-Distal	6.06588	40.44139	K562	HNRNPL
chr3	196044153	196044179	-	intron-Distal	4.83864	6.36545	HepG2	HNRNPL
chr3	196043559	196043601	-	intron-Distal	5.54975	22.59548	K562	AGGF1
chr3	196044144	196044189	-	intron-Distal	4.53041	4.95161	K562	GTF2F1
chr3	195978836	195979001	-	intron-Distal	3.58367	7.66248	K562	DROSHA
chr3	196014313	196014451	-	5'-UTR,intron-Distal	3.55081	5.32227	K562	EFTUD2
chr3	195978868	195978989	-	intron-Distal	3.12850	3.51708	K562	RBFOX2
chr3	196043361	196043388	-	intron-Distal	6.05081	14.30686	K562	AGGF1
chr3	196043638	196043708	-	intron-Distal	7.52055	77.83592	K562	AGGF1
chr3	196043783	196043828	-	intron-Distal	5.24833	14.10108	HepG2	HNRNPL
chr3	196044548	196044689	-	intron-Distal	3.96289	6.54942	K562	NONO
chr3	196043974	196043984	-	intron-Distal	4.84070	6.37635	HepG2	HNRNPL
chr3	195978014	195978068	-	intron-Distal	6.22584	8.47410	K562	DROSHA
chr3	196044432	196044484	-	intron-Distal	4.17461	3.60879	K562	HNRNPL
chr3	196044613	196044664	-	intron-Distal	4.99154	8.57115	K562	HNRNPL
chr3	196044036	196044068	-	intron-Distal	4.42938	4.49526	HepG2	AGGF1
chr3	196043896	196043957	-	intron-Distal	4.10136	6.38153	HepG2	AGGF1
chr3	196043769	196043827	-	intron-Distal	3.14380	4.81996	HepG2	AGGF1
chr3	196043896	196043969	-	intron-Distal	4.48018	25.72839	HepG2	HNRNPL
chr3	196044731	196044887	-	intron-Distal	3.62309	4.66361	K562	XRN2
chr3	196044849	196044882	-	intron-Distal	6.24339	15.84732	K562	AGGF1
chr3	196044755	196044879	-	intron-Distal	4.43536	5.25929	HepG2	GTF2F1
chr3	196044749	196044829	-	intron-Distal	5.43274	36.02675	K562	AGGF1
chr3	196043786	196043836	-	intron-Distal	3.54338	5.92430	K562	AKAP8L
chr3	196044618	196044687	-	intron-Distal	3.06860	3.50009	K562	CSTF2T
chr3	196043653	196043697	-	intron-Distal	4.17900	8.36566	HepG2	AGGF1
chr3	196044716	196044829	-	intron-Distal	3.62554	8.20573	HepG2	AGGF1
chr3	196044576	196044673	-	intron-Distal	3.85386	6.03664	K562	GTF2F1
chr3	196043662	196043702	-	intron-Distal	3.66416	4.10368	K562	AKAP8L
chr3	196043523	196043554	-	intron-Distal	5.25043	9.43003	K562	HNRNPL
chr3	196044841	196044889	-	intron-Distal	4.49154	6.18384	K562	HNRNPL
chr3	196044034	196044072	-	intron-Distal	5.90765	22.33763	K562	AGGF1
chr3	196044752	196044786	-	intron-Distal	4.75667	4.46189	K562	GTF2F1
chr3	196044594	196044682	-	intron-Distal	3.96738	4.99833	K562	AKAP8L
chr3	195977778	195977826	-	intron-Distal	4.92271	3.62726	K562	DROSHA
chr3	196044569	196044626	-	intron-Distal	4.21868	5.66595	HepG2	AGGF1
chr3	196043510	196043559	-	intron-Distal	5.66108	25.77169	K562	AGGF1
chr3	195978893	195979054	-	intron-Distal	3.99334	5.78025	HepG2	RBFOX2
chr3	196043910	196043954	-	intron-Distal	4.24203	15.45634	K562	HNRNPL
chr3	196043652	196043699	-	intron-Distal	5.28640	6.02367	K562	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-447L10.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-447L10.1 is not available on ENCORE database.
6 RBPs can affect the levels of RP11-447L10.1.

The Knockdown/knockout RNA-Seq assay for RP11-447L10.1 is not available on ENCORE database.

6 RBPs can affect the gene expression of RP11-447L10.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-447L10.1	ENSG00000272741.1	0.00000	9.46870	-99999.99999	2.58960	1.50510	K562	FKBP4
RP11-447L10.1	ENSG00000272741.1	8.33670	0.00000	99999.99990	2.41220	1.56290	K562	FTO
RP11-447L10.1	ENSG00000272741.1	0.00000	10.56750	-99999.99999	3.15060	1.64580	K562	LARP7
RP11-447L10.1	ENSG00000272741.1	0.00000	10.66870	-99999.99999	3.22840	1.66770	K562	PHF6
RP11-447L10.1	ENSG00000272741.1	0.00000	9.80050	-99999.99999	2.56110	1.69650	K562	PSIP1
RP11-447L10.1	ENSG00000272741.1	0.00000	9.42750	-99999.99999	2.49300	1.60970	K562	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-447L10.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-447L10.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RP11-447L10.1	ENSG00000272741.1	chr3	-	195984658	195984758			195975100	195975194	195997285	195997412	-0.07900	0.00067	0.00872	excluded	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-447L10.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-447L10.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-447L10.1 is not avaliable on ENCORE database.

19 proteins are bound to RP11-447L10.1 RNA:

eCLIP assay for RP11-447L10.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-447L10.1 is not available on ENCORE database.

6 RBPs can affect the gene expression of RP11-447L10.1 :

The Knockdown/knockout RNA-Seq assay for RP11-447L10.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-447L10.1 :

The Knockdown/knockout RNA-Seq assay for RP11-447L10.1 is not avaliable on ENCORE database.