RP11-155D18.14

General Information

Gene Name       : RP11-155D18.14
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-155D18.14)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-155D18.14 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-155D18.14 RNA is bound by 21 proteins.  







eCLIP assay for RP11-155D18.14 is not avaliable on ENCORE database.





21 proteins are bound to RP11-155D18.14 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35199529951995328-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.023903.20743HepG2PPIG
chr35200781152007999-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.7246013.79445HepG2HNRNPK
chr35200798052008034-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.526986.03393K562YBX3
chr35199482051994885-3'-UTR,CDS,intron-Distal,intron-Proximal3.057615.50267HepG2PRPF8
chr35199420751994333-3'-UTR,CDS,intron-Distal,intron-Proximal3.807079.86479HepG2PPIG
chr35199449451994544-3'-UTR,CDS,intron-Distal,intron-Proximal4.549618.77485HepG2PRPF8
chr35200300152003053-3'-UTR,intron-Distal,intron-Proximal3.2758113.48274K562PCBP1
chr35200173552001812-intron-Distal3.8256411.25734HepG2FAM120A
chr35200300952003178-3'-UTR,intron-Distal,intron-Proximal4.1473922.15615HepG2PCBP2
chr35200277352002857-3'-UTR,intron-Distal3.365828.82033HepG2HNRNPL
chr35200568952005749-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.094217.29636K562YBX3
chr35200533652005398-intron-Distal,intron-Proximal3.072793.58507HepG2XPO5
chr35200147652001519-intron-Distal,intron-Proximal3.858965.44474HepG2FAM120A
chr35200181252001889-intron-Distal4.109689.90916HepG2FAM120A
chr35200165452001699-intron-Distal4.084047.82628HepG2CSTF2T
chr35200260552002667-3'-UTR,intron-Distal3.060464.31585HepG2DDX55
chr35200311152003180-3'-UTR,intron-Distal3.3731316.25335K562DDX55
chr35200123152001295-intron-Distal,intron-Proximal4.241254.48935K562CSTF2T
chr35200324952003317-3'-UTR,intron-Distal,intron-Proximal3.340594.59863HepG2PTBP1
chr35200325252003328-3'-UTR,intron-Distal,intron-Proximal3.441815.20401HepG2SUB1
chr35200302152003172-3'-UTR,intron-Distal,intron-Proximal4.204409.46132HepG2PCBP1
chr35200400352004088-CDS,intron-Distal3.4584010.34414K562YBX3
chr35200620952006257-intron-Distal3.773923.60940HepG2HNRNPC
chr35200287252002992-3'-UTR,intron-Distal3.407949.25779HepG2DDX55
chr35200292652003076-3'-UTR,intron-Distal,intron-Proximal3.4307831.80796K562PABPC4
chr35200560252005733-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.099993.35417K562METAP2
chr35200292852002987-3'-UTR,intron-Distal3.588196.03658HepG2HNRNPL
chr35200261552002669-3'-UTR,intron-Distal3.9559811.88113K562PABPC4
chr35200278552002854-3'-UTR,intron-Distal4.175949.96973K562PABPC4
chr35200112952001190-intron-Distal3.260607.33122HepG2CSTF2T
chr35200278452002839-3'-UTR,intron-Distal5.247579.44079K562IGF2BP2
chr35200045252000506-intron-Distal4.158283.57018HepG2HNRNPK
chr35200208352002116-intron-Distal4.550966.08348HepG2CSTF2T
chr35200172152001910-intron-Distal3.799666.73715HepG2PRPF4
chr35200259952002657-3'-UTR,intron-Distal3.211663.85107K562UPF1
chr35200182252001871-intron-Distal4.234837.34629HepG2CSTF2T
chr35200173152001806-intron-Distal4.9505016.29788HepG2CSTF2T
chr35200124052001300-intron-Distal,intron-Proximal3.5915710.22167HepG2CSTF2T
chr35199848451998555-intron-Distal4.434963.70291HepG2FAM120A
chr35200285352002914-3'-UTR,intron-Distal3.338857.86646K562HNRNPL
chr35199807551998147-intron-Distal3.730873.17740K562CSTF2T
chr35200291752002973-3'-UTR,intron-Distal3.922007.43791K562IGF2BP2
chr35200355952003619-3'-UTR,CDS,intron-Distal3.125316.35167K562YBX3
chr35200196552002019-intron-Distal3.110825.52498HepG2CSTF2T
chr35200014552000231-intron-Distal4.261998.61746HepG2HNRNPK
chr35200022952000300-intron-Distal3.201993.37981HepG2RBFOX2
chr35200780552007974-intron-Distal,intron-Proximal4.200028.41956K562HNRNPK
chr35200148052001522-intron-Distal,intron-Proximal4.756376.58550HepG2CSTF2T
chr35200276852002854-3'-UTR,intron-Distal3.385746.69575HepG2DDX55
chr35199809851998171-intron-Distal3.578717.80345HepG2CSTF2T
chr35200255152002585-3'-UTR,intron-Distal,intron-Proximal3.477544.35339HepG2CSTF2T
chr35200494852005034-intron-Distal3.663089.57582HepG2XPO5
chr35200311052003181-3'-UTR,intron-Distal4.7432543.47358K562PCBP1
chr35200278852002849-3'-UTR,intron-Distal3.309988.23713K562HNRNPL
chr35200300452003065-3'-UTR,intron-Distal,intron-Proximal3.518269.70976HepG2HNRNPL
chr35200275352002818-3'-UTR,intron-Distal4.456894.14518HepG2GTF2F1
chr35200296552003115-3'-UTR,intron-Distal,intron-Proximal3.956785.36498HepG2UPF1
chr35200305352003110-3'-UTR,intron-Distal,intron-Proximal4.0011331.53521K562PCBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-155D18.14 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-155D18.14 is not available on ENCORE database.

  • 7 RBPs can affect the levels of RP11-155D18.14.  








The Knockdown/knockout RNA-Seq assay for RP11-155D18.14 is not available on ENCORE database.





7 RBPs can affect the gene expression of RP11-155D18.14 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-155D18.14ENSG00000272762.118.093800.0000099999.999905.198103.03310HepG2NUP35
RP11-155D18.14ENSG00000272762.19.440100.0000099999.999902.707201.41020HepG2SART3
RP11-155D18.14ENSG00000272762.10.000006.80190-99999.999992.114501.52360HepG2SF3A3
RP11-155D18.14ENSG00000272762.10.0000025.93840-99999.999993.259202.49890HepG2SF3B1
RP11-155D18.14ENSG00000272762.15.935500.0000099999.999901.777901.30540HepG2TRIM56
RP11-155D18.14ENSG00000272762.10.000006.63440-99999.999992.073901.58150HepG2ZNF622
RP11-155D18.14ENSG00000272762.17.781100.0000099999.999902.198901.35610K562SRPK2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-155D18.14 is not available on ENCORE database.





3 RBPs can affect the splicing of RP11-155D18.14 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-155D18.14ENSG00000272762.1chr3-519945415199465851994316519943365199488151994914-0.077000.001240.02456excludedHepG2U2AF1
A3SSRP11-155D18.14ENSG00000272762.1chr3-5199454151994658519945415199465351994881519949140.099000.000060.03031longerHepG2HNRNPUL1
A3SSRP11-155D18.14ENSG00000272762.1chr3-5199454151994658519945415199465351994881519949140.090000.000020.00880longerHepG2SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-155D18.14 is not avaliable on ENCORE database.