PMS2P3

General Information

Gene Name : PMS2P3
Gene ID : ENSG00000127957.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PMS2P3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PMS2P3	ENSG00000127957.17	12.86	5.96	9.41	ENCSR000AEF
HepG2	PMS2P3	ENSG00000127957.17	6.87	6.36	6.62	ENCSR985KAT
K562	PMS2P3	ENSG00000127957.17	10.21	8.63	9.42	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PMS2P3 is not avaliable on ENCORE database.

Proteins bound to RNA

PMS2P3 RNA is bound by 21 proteins.

eCLIP assay for PMS2P3 is not avaliable on ENCORE database.

21 proteins are bound to PMS2P3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	75157122	75157204	-	intron-Distal,intron-Proximal	3.52003	3.19036	K562	XRN2
chr7	75144095	75144107	-	intron-Distal,intron-Proximal	3.91652	5.80935	K562	ZNF622
chr7	75145042	75145074	-	intron-Distal,intron-Proximal	4.80532	11.98007	K562	ZNF622
chr7	75141912	75141945	-	intron-Distal,intron-Proximal	3.14820	5.89932	K562	ZNF622
chr7	75157080	75157162	-	intron-Distal,intron-Proximal	4.41330	7.79539	K562	UCHL5
chr7	75141696	75141748	-	intron-Distal,intron-Proximal	3.12407	5.00751	HepG2	BCLAF1
chr7	75157106	75157191	-	intron-Distal,intron-Proximal	3.03784	4.62806	K562	CSTF2T
chr7	75132371	75132464	-	intron-Distal	3.04847	5.47259	K562	SLTM
chr7	75151707	75151793	-	intron-Distal	3.16146	3.20628	K562	HNRNPL
chr7	75145074	75145118	-	intron-Distal	4.20415	11.38767	K562	ZNF622
chr7	75145041	75145109	-	intron-Distal,intron-Proximal	4.23345	14.25229	K562	DDX24
chr7	75155657	75155705	-	intron-Distal	3.01602	3.00589	HepG2	HNRNPC
chr7	75140150	75140253	-	intron-Distal,intron-Proximal	6.91799	17.35737	K562	AQR
chr7	75153269	75153311	-	intron-Distal	3.95721	6.51675	HepG2	SUGP2
chr7	75145003	75145056	-	intron-Distal,intron-Proximal	3.77773	5.28701	K562	PRPF8
chr7	75144081	75144109	-	intron-Distal,intron-Proximal	5.15371	8.43384	K562	UCHL5
chr7	75150842	75150962	-	intron-Distal	3.55268	5.78064	K562	KHSRP
chr7	75145047	75145114	-	intron-Distal	4.33805	12.34066	K562	UCHL5
chr7	75145538	75145588	-	intron-Distal,intron-Proximal	5.36168	6.90654	K562	SF3B4
chr7	75155642	75155707	-	intron-Distal	3.00012	3.79499	K562	HNRNPC
chr7	75155086	75155134	-	intron-Distal	3.46939	4.23459	K562	PRPF8
chr7	75157063	75157200	-	intron-Distal,intron-Proximal	3.88882	11.38510	HepG2	PPIG
chr7	75156847	75156897	-	intron-Distal,intron-Proximal	5.13850	6.75320	K562	AQR
chr7	75141640	75141664	-	intron-Distal	3.42547	5.65306	K562	ZNF622
chr7	75144085	75144109	-	intron-Distal,intron-Proximal	5.23872	7.49561	HepG2	BCLAF1
chr7	75140321	75140382	-	intron-Distal,intron-Proximal	3.19388	12.84530	K562	ZNF622
chr7	75147023	75147154	-	intron-Distal	3.68553	11.54160	K562	KHSRP
chr7	75157081	75157189	-	intron-Distal,intron-Proximal	3.61824	12.39630	K562	GEMIN5
chr7	75157303	75157376	-	intron-Distal	3.35917	3.10628	K562	HNRNPM
chr7	75132874	75132923	-	intron-Distal	3.84355	3.41489	HepG2	CSTF2
chr7	75145042	75145086	-	intron-Distal,intron-Proximal	5.68227	10.24913	HepG2	BCLAF1
chr7	75157088	75157228	-	intron-Distal,intron-Proximal	4.31256	9.49794	HepG2	PRPF4
chr7	75157119	75157167	-	intron-Distal,intron-Proximal	4.15428	7.39346	K562	DDX24
chr7	75140318	75140421	-	intron-Distal,intron-Proximal	4.55969	12.64509	HepG2	GRWD1
chr7	75157268	75157367	-	intron-Distal	4.21418	4.62931	K562	SRSF1
chr7	75145042	75145047	-	intron-Distal,intron-Proximal	5.34959	9.54318	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PMS2P3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PMS2P3 is not available on ENCORE database.
10 RBPs can affect the levels of PMS2P3.

The Knockdown/knockout RNA-Seq assay for PMS2P3 is not available on ENCORE database.

10 RBPs can affect the gene expression of PMS2P3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PMS2P3	ENSG00000127957.12	156.17150	78.47420	0.99270	4.02970	3.23990	HepG2	MAGOH
PMS2P3	ENSG00000127957.12	98.11300	53.89060	0.86430	2.23240	1.55790	HepG2	NSUN2
PMS2P3	ENSG00000127957.12	445.68410	317.19260	0.49060	2.85530	2.25890	K562	AQR
PMS2P3	ENSG00000127957.12	271.13400	177.20350	0.61350	2.73790	1.92120	K562	EIF4A3
PMS2P3	ENSG00000127957.12	221.35720	153.08220	0.53200	2.18570	1.64650	K562	HNRNPC
PMS2P3	ENSG00000127957.12	307.59980	451.38140	-0.55330	2.30350	1.48640	K562	MBNL1
PMS2P3	ENSG00000127957.12	105.70070	160.85180	-0.60570	2.20920	1.49380	K562	POLR2G
PMS2P3	ENSG00000127957.12	221.08410	142.67050	0.63180	2.63220	1.34030	K562	RBM25
PMS2P3	ENSG00000127957.12	86.81540	143.29430	-0.72300	2.55730	1.51870	K562	SAFB
PMS2P3	ENSG00000127957.12	395.66360	286.48250	0.46570	3.16630	2.40030	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PMS2P3 is not available on ENCORE database.

5 RBPs can affect the splicing of PMS2P3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PMS2P3	ENSG00000127957.12	chr7	-	75141632	75141745	75140252	75140436	75141912	75141999	-0.29300	0.00077	0.03084	excluded	K562	PRPF8
SE	PMS2P3	ENSG00000127957.12	chr7	-	75141632	75141745	75140252	75140436	75141912	75141999	-0.21700	0.00002	0.00059	excluded	K562	PUS1
SE	PMS2P3	ENSG00000127957.12	chr7	-	75141632	75141745	75140252	75140436	75141912	75141999	-0.23700	0.00003	0.00168	excluded	K562	RBM15
SE	PMS2P3	ENSG00000127957.12	chr7	-	75141632	75141745	75140252	75140436	75141912	75141999	-0.26700	0.00000	0.00021	excluded	K562	AGGF1
A3SS	PMS2P3	ENSG00000127957.12	chr7	-	75141632	75141821	75141632	75141745	75141912	75142073	0.14900	0.00021	0.00168	longer	K562	AQR
A3SS	PMS2P3	ENSG00000127957.12	chr7	-	75145069	75145286	75145069	75145153	75145419	75145546	0.08600	0.00001	0.00009	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PMS2P3

General Information

Functions

Localization

Domains (AlphaFold: PMS2P3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PMS2P3 is not avaliable on ENCORE database.

21 proteins are bound to PMS2P3 RNA:

eCLIP assay for PMS2P3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PMS2P3 is not available on ENCORE database.

10 RBPs can affect the gene expression of PMS2P3 :

The Knockdown/knockout RNA-Seq assay for PMS2P3 is not available on ENCORE database.

5 RBPs can affect the splicing of PMS2P3 :

The Knockdown/knockout RNA-Seq assay for PMS2P3 is not avaliable on ENCORE database.