GUSBP1

General Information

Gene Name       : GUSBP1
Gene ID             : ENSG00000183666.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GUSBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GUSBP1ENSG00000183666.164.477.375.92ENCSR000AEF
HepG2GUSBP1ENSG00000183666.168.997.528.25ENCSR985KAT
K562GUSBP1ENSG00000183666.1613.028.4210.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GUSBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GUSBP1 RNA is bound by 19 proteins.  







eCLIP assay for GUSBP1 is not avaliable on ENCORE database.





19 proteins are bound to GUSBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr52148393821483985+intron-Distal3.236205.80077K562CSTF2T
chr52148208721482130+intron-Distal3.424024.67419K562FUS
chr52148026521480364+intron-Distal3.708004.28919HepG2KHSRP
chr52148393421483985+intron-Distal4.988918.33381K562FUS
chr52149146221491535+intron-Distal3.5456028.97261HepG2BCLAF1
chr52148217321482232+intron-Distal3.027927.68212K562FUS
chr52149145721491533+intron-Distal3.369297.99158HepG2UCHL5
chr52148322821483290+intron-Distal3.687977.14178K562DROSHA
chr52148322321483279+intron-Distal4.094695.80829K562TAF15
chr52148663221486701+intron-Distal4.135773.62025K562MATR3
chr52148447521484538+intron-Distal3.309565.10348K562EWSR1
chr52148322721483285+intron-Distal3.145013.39414K562HNRNPA1
chr52148295021483002+intron-Distal3.104354.05483K562TAF15
chr52148226221482340+intron-Distal4.2962810.76744K562EWSR1
chr52148177021481844+intron-Distal4.776273.86024K562EWSR1
chr52148389021483921+intron-Distal4.355204.14056K562EWSR1
chr52148355621483633+intron-Distal3.804985.78810K562TAF15
chr52148223221482252+intron-Distal3.204074.30647K562FUS
chr52148321821483288+intron-Distal4.3029314.87451K562FUS
chr52148228721482341+intron-Distal3.845294.99549K562TAF15
chr52148279121482842+intron-Distal3.724747.18598K562DROSHA
chr52148394121483994+intron-Distal3.297938.36475K562TIA1
chr52145962621459691+intron-Distal,intron-Proximal4.342625.05409HepG2NCBP2
chr52148276821482845+intron-Distal3.935789.91449K562TAF15
chr52148295121483000+intron-Distal3.673229.80522K562FUS
chr52148353821483609+intron-Distal3.6199810.69557K562FUS
chr52148225221482285+intron-Distal4.685006.72131K562FUS
chr52148227721482340+intron-Distal5.2730021.47133K562CSTF2T
chr52148322021483288+intron-Distal4.0983514.67289K562CSTF2T
chr52148209121482132+intron-Distal4.666956.27023K562EWSR1
chr52148447521484538+intron-Distal4.009733.01989K562TAF15
chr52153380521533935+intron-Distal3.386484.26114HepG2HNRNPL
chr52149148521491535+intron-Distal3.139158.53313HepG2PPIG
chr52148294921483005+intron-Distal5.285246.12846K562EWSR1
chr52148354521483626+intron-Distal3.326236.74654K562CSTF2T
chr52148175121481783+intron-Distal3.917213.52365K562FUS
chr52148353121483617+intron-Distal4.020636.32338K562NONO
chr52148228321482339+intron-Distal4.930108.09947K562NONO
chr52148277621482846+intron-Distal3.304735.34585K562SMNDC1
chr52148340721483443+intron-Distal4.014313.15856K562FUS
chr52148439421484445+intron-Distal4.761474.70436K562EWSR1
chr52149719321497250+intron-Distal3.190924.14618K562ZNF622
chr52148482421484867+intron-Distal3.918983.02711K562EWSR1
chr52148393621483987+intron-Distal3.552554.58795K562EWSR1
chr52148354221483624+intron-Distal3.581867.95323K562EWSR1
chr52148438721484464+intron-Distal3.651969.23213K562FUS
chr52148341921483436+intron-Distal3.200273.15535K562EWSR1
chr52148192621482012+intron-Distal3.864116.78069K562FUS
chr52148295021483003+intron-Distal3.313338.75669K562CSTF2T
chr52148448521484532+intron-Distal3.382473.93430K562FUS
chr52148276321482844+intron-Distal4.5392317.94017K562EWSR1
chr52148363321483702+intron-Distal3.968113.40229HepG2CSTF2T
chr52148031121480421+intron-Distal4.771205.18300K562SRSF1
chr52148036421480426+intron-Distal4.244613.82910K562NONO
chr52148276821482847+intron-Distal4.3772215.48983K562FUS
chr52148276821482832+intron-Distal4.624465.43397K562NOLC1
chr52148276921482845+intron-Distal3.146655.48390K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GUSBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GUSBP1 is not available on ENCORE database.

  • 30 RBPs can affect the levels of GUSBP1.  








The Knockdown/knockout RNA-Seq assay for GUSBP1 is not available on ENCORE database.





30 RBPs can affect the gene expression of GUSBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GUSBP1ENSG00000183666.12188.6801095.474800.982704.704803.87380HepG2EIF4A3
GUSBP1ENSG00000183666.12112.4538063.531100.823702.360501.71480HepG2HNRNPC
GUSBP1ENSG00000183666.12179.3735096.374700.896103.844303.07180HepG2MAGOH
GUSBP1ENSG00000183666.12122.2590079.528600.620302.128801.58460HepG2PCBP1
GUSBP1ENSG00000183666.12131.6912079.539400.727302.593201.93750HepG2RBM25
GUSBP1ENSG00000183666.12133.3904083.894700.668902.366301.79000HepG2RECQL
GUSBP1ENSG00000183666.12148.2013087.940000.752902.907202.42590HepG2SRSF1
GUSBP1ENSG00000183666.12125.6443084.162800.578001.899801.31150HepG2SRSF7
GUSBP1ENSG00000183666.12139.69600270.33000-0.952406.816505.98320K562AGGF1
GUSBP1ENSG00000183666.12186.53470297.05070-0.671303.995302.77010K562AKAP8
GUSBP1ENSG00000183666.12146.05530281.29030-0.945506.431805.40440K562AKAP8L
GUSBP1ENSG00000183666.12433.78440221.624500.968806.619105.77510K562AQR
GUSBP1ENSG00000183666.12166.74630295.14080-0.823706.068704.64780K562ATP5C1
GUSBP1ENSG00000183666.12218.55140323.06010-0.563803.413102.08400K562CCDC124
GUSBP1ENSG00000183666.12208.24800317.17110-0.607003.480801.83490K562DDX19B
GUSBP1ENSG00000183666.12300.16900178.975700.745904.346903.55600K562DDX47
GUSBP1ENSG00000183666.12159.86610302.69030-0.921007.587506.00680K562DKC1
GUSBP1ENSG00000183666.12134.3438075.532000.830702.958902.13640K562EIF3G
GUSBP1ENSG00000183666.12136.5053088.502800.625102.070101.35680K562EIF4A3
GUSBP1ENSG00000183666.12153.5216092.037800.738002.943702.32230K562FXR1
GUSBP1ENSG00000183666.12344.46790235.361500.549402.986702.20280K562GRSF1
GUSBP1ENSG00000183666.12148.54920298.52030-1.006907.684806.14150K562KIF1C
GUSBP1ENSG00000183666.12147.25610285.75660-0.956506.361104.45960K562MAK16
GUSBP1ENSG00000183666.12184.60270334.41800-0.857206.309504.83010K562MBNL1
GUSBP1ENSG00000183666.12227.10470131.475400.788504.732403.69760K562MTPAP
GUSBP1ENSG00000183666.1290.66170234.40270-1.370407.604005.85720K562NAA15
GUSBP1ENSG00000183666.12102.92680225.12530-1.129102.720301.74070K562PABPN1
GUSBP1ENSG00000183666.12152.86130100.224900.608902.403701.77760K562PTBP1
GUSBP1ENSG00000183666.12118.27050278.96480-1.238008.535507.62910K562PUS1
GUSBP1ENSG00000183666.12109.15090271.80750-1.3163011.108409.94170K562RBM15
GUSBP1ENSG00000183666.12142.60410282.83920-0.988004.422102.64830K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GUSBP1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GUSBP1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GUSBP1 is not avaliable on ENCORE database.