F11-AS1

General Information

Gene Name       : F11-AS1
Gene ID             : ENSG00000251165.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: F11-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878F11-AS1ENSG00000251165.50.000.000.00ENCSR000AEF
HepG2F11-AS1ENSG00000251165.50.000.000.00ENCSR985KAT
K562F11-AS1ENSG00000251165.53.7720.3112.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for F11-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • F11-AS1 RNA is bound by 7 proteins.  







eCLIP assay for F11-AS1 is not avaliable on ENCORE database.





7 proteins are bound to F11-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4187326981187327073-intron-Distal5.733216.58769K562EIF4G2
chr4187397607187397668-intron-Distal6.2539515.78528K562EIF4G2
chr4187327117187327219-intron-Distal5.0074311.45661K562EIF4G2
chr4187327430187327485-intron-Distal5.318176.58769K562EIF4G2
chr4187399780187399846-intron-Distal4.834033.72755K562EIF4G2
chr4187353384187353501-intron-Distal,intron-Proximal4.149048.46178K562CSTF2T
chr4187357065187357122-intron-Distal4.984338.84234K562CSTF2T
chr4187398428187398477-intron-Distal3.440736.76965K562EIF4G2
chr4187406461187406544-intron-Distal4.444864.65580K562GTF2F1
chr4187400012187400094-intron-Distal3.918646.42186K562TARDBP
chr4187406461187406546-intron-Distal4.269543.80314K562CSTF2T
chr4187417354187417476-intron-Distal5.9123610.44241K562PTBP1
chr4187407037187407152-intron-Distal4.660547.22570K562EIF4G2
chr4187396274187396314-intron-Distal4.461843.92866K562PTBP1
chr4187417262187417323-intron-Distal4.669354.90095K562PTBP1
chr4187420212187420279-intron-Distal5.086758.14280K562TARDBP
chr4187397533187397668-intron-Distal3.559384.48425K562CSTF2T
chr4187396643187396697-intron-Distal4.412365.03657K562PTBP1
chr4187397702187397745-intron-Distal4.148255.23268K562EIF4G2
chr4187327231187327282-intron-Distal5.233216.58769K562EIF4G2
chr4187327078187327175-intron-Distal4.005213.34609K562TARDBP
chr4187397989187398028-intron-Distal5.233217.68107K562EIF4G2
chr4187397536187397600-intron-Distal5.340967.26071K562EIF4G2
chr4187399915187399981-intron-Distal4.922475.62492K562EIF4G2
chr4187327321187327389-intron-Distal4.309216.82317K562EIF4G2
chr4187397576187397663-intron-Distal4.926496.58558K562DHX30
chr4187406950187407013-intron-Distal4.446713.94682K562EIF4G2
chr4187401575187401658-intron-Distal4.679253.98636K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for F11-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for F11-AS1 is not available on ENCORE database.

  • 17 RBPs can affect the levels of F11-AS1.  








The Knockdown/knockout RNA-Seq assay for F11-AS1 is not available on ENCORE database.





17 RBPs can affect the gene expression of F11-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
F11-AS1ENSG00000251165.174.49110277.02430-1.8949013.5729012.41800K562AGGF1
F11-AS1ENSG00000251165.1157.55370304.35930-0.949906.078504.48170K562AKAP8
F11-AS1ENSG00000251165.1101.23050288.24440-1.509609.752308.43160K562AKAP8L
F11-AS1ENSG00000251165.1128.16660302.41520-1.238509.119807.33850K562ATP5C1
F11-AS1ENSG00000251165.1180.21950325.02440-0.850805.379503.27950K562DDX19B
F11-AS1ENSG00000251165.127.5500060.35440-1.131402.365701.80760K562HNRNPC
F11-AS1ENSG00000251165.1227.42660113.480501.002905.661804.53800K562HSPD1
F11-AS1ENSG00000251165.1131.02320305.94120-1.223406.740905.32100K562KIF1C
F11-AS1ENSG00000251165.1162.35360292.82710-0.850904.531803.05700K562MAK16
F11-AS1ENSG00000251165.1128.93510342.72560-1.410406.180104.71760K562MBNL1
F11-AS1ENSG00000251165.179.23280240.22210-1.600207.263105.57520K562NAA15
F11-AS1ENSG00000251165.145.65930113.71660-1.316503.449302.30800K562PABPN1
F11-AS1ENSG00000251165.146.1930083.02410-0.845902.049201.33370K562PCBP3
F11-AS1ENSG00000251165.159.11170285.94480-2.2742016.9676015.66410K562PUS1
F11-AS1ENSG00000251165.154.86110278.53930-2.3440018.2274016.67450K562RBM15
F11-AS1ENSG00000251165.188.9744049.169400.855502.632201.38920K562SSB
F11-AS1ENSG00000251165.1113.76670289.83180-1.349104.617302.78840K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for F11-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of F11-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for F11-AS1 is not avaliable on ENCORE database.