WDR12

General Information

Gene Name : WDR12
Gene ID : ENSG00000138442.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: WDR12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	WDR12	ENSG00000138442.9	54.00	52.62	53.31	ENCSR000AEF
HepG2	WDR12	ENSG00000138442.9	74.72	99.13	86.92	ENCSR985KAT
K562	WDR12	ENSG00000138442.9	98.87	98.72	98.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for WDR12 is not avaliable on ENCORE database.

Proteins bound to RNA

WDR12 RNA is bound by 18 proteins.

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eCLIP assay for WDR12 is not avaliable on ENCORE database.

18 proteins are bound to WDR12 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	203764275	203764358	-	CDS,intron-Distal,intron-Proximal	6.04258	13.75753	K562	ZNF622
chr2	203760835	203760928	-	CDS,intron-Distal	3.91363	13.45280	HepG2	BCLAF1
chr2	203757331	203757378	-	CDS,intron-Distal,intron-Proximal	3.67044	13.41578	HepG2	BUD13
chr2	203776196	203776219	-	5'-UTR,CDS,intron-Distal	3.36635	10.89609	K562	YBX3
chr2	203757354	203757408	-	CDS,intron-Distal,intron-Proximal	5.49016	10.65697	K562	UCHL5
chr2	203776225	203776288	-	5'-UTR,intron-Distal	3.18304	10.58200	K562	YBX3
chr2	203760659	203760746	-	intron-Distal,intron-Proximal	4.62714	10.39215	K562	PRPF8
chr2	203776190	203776196	-	CDS,intron-Distal	3.13894	10.35731	K562	YBX3
chr2	203749213	203749258	-	CDS,intron-Distal	3.84994	9.86479	HepG2	PPIG
chr2	203762080	203762138	-	CDS,intron-Distal	4.04571	9.50935	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 64 entries

eCLIP assay for WDR12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for WDR12 is not available on ENCORE database.
105 RBPs can affect the levels of WDR12.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for WDR12 is not available on ENCORE database.

105 RBPs can affect the gene expression of WDR12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
WDR12	ENSG00000138442.5	1113.48870	2156.32620	-0.95350	31.64140	30.03140	HepG2	SF3B4
WDR12	ENSG00000138442.5	1520.28160	2511.47480	-0.72420	26.05980	24.22080	HepG2	DAZAP1
WDR12	ENSG00000138442.5	790.39300	1875.66230	-1.24680	22.68770	21.09960	HepG2	EIF2S1
WDR12	ENSG00000138442.5	1714.44460	3416.61760	-0.99480	21.84960	20.37880	K562	AQR
WDR12	ENSG00000138442.5	1315.55480	2177.85390	-0.72720	20.01550	18.45360	HepG2	SRSF7
WDR12	ENSG00000138442.5	1741.30050	2816.95140	-0.69400	17.99620	16.39360	K562	EIF2S2
WDR12	ENSG00000138442.5	945.05080	1824.98190	-0.94940	17.99960	15.64870	K562	SF3B4
WDR12	ENSG00000138442.5	888.75460	1672.06270	-0.91180	16.35360	14.99250	HepG2	HNRNPA1
WDR12	ENSG00000138442.5	1270.57740	2413.95000	-0.92590	16.08970	14.60010	HepG2	CPSF6
WDR12	ENSG00000138442.5	1432.25980	2216.71980	-0.63010	15.34370	13.83260	HepG2	HNRNPF
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 128 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for WDR12 is not available on ENCORE database.

8 RBPs can affect the splicing of WDR12 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	WDR12	ENSG00000138442.5	chr2	-	203759303	203759349			203757339	203757425	203760787	203760942	-0.05600	0.00000	0.00000	excluded	K562	AQR
MXE	WDR12	ENSG00000138442.5	chr2	-	203760787	203760938	203762022	203762138	203757339	203757425	203764253	203764360	-0.06900	0.00000	0.00000	2included	K562	AQR
MXE	WDR12	ENSG00000138442.5	chr2	-	203760787	203760942	203762022	203762138	203757339	203757425	203764253	203764360	-0.11900	0.00000	0.00000	2included	K562	AQR
MXE	WDR12	ENSG00000138442.5	chr2	-	203762022	203762138	203764253	203764360	203760787	203760942	203765747	203765842	0.15300	0.00000	0.00096	1included	K562	AARS
MXE	WDR12	ENSG00000138442.5	chr2	-	203762022	203762138	203764253	203764360	203760787	203760942	203765747	203765842	0.22200	0.00000	0.00003	1included	K562	DDX55
MXE	WDR12	ENSG00000138442.5	chr2	-	203762022	203762138	203764253	203764360	203760787	203760942	203765747	203765842	0.23400	0.00002	0.00208	1included	K562	PPIL4
SE	WDR12	ENSG00000138442.5	chr2	-	203759303	203759341			203757339	203757425	203760787	203760942	-0.12300	0.00004	0.00232	excluded	HepG2	SF3A3
MXE	WDR12	ENSG00000138442.5	chr2	-	203764253	203764360	203765747	203765842	203760787	203760942	203772587	203772682	-0.06300	0.00036	0.00377	2included	K562	AQR
SE	WDR12	ENSG00000138442.5	chr2	-	203762022	203762155			203760787	203760942	203764253	203764396	-0.05100	0.00052	0.00704	excluded	K562	AQR
MXE	WDR12	ENSG00000138442.5	chr2	-	203762022	203762138	203764253	203764360	203760787	203760942	203765747	203765842	-0.08700	0.00150	0.09051	2included	K562	CPSF6

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

WDR12

General Information

Functions

Localization

Domains (AlphaFold: WDR12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for WDR12 is not avaliable on ENCORE database.

18 proteins are bound to WDR12 RNA:

eCLIP assay for WDR12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for WDR12 is not available on ENCORE database.

105 RBPs can affect the gene expression of WDR12 :

The Knockdown/knockout RNA-Seq assay for WDR12 is not available on ENCORE database.

8 RBPs can affect the splicing of WDR12 :

The Knockdown/knockout RNA-Seq assay for WDR12 is not avaliable on ENCORE database.