TNS3

General Information

Gene Name : TNS3
Gene ID : ENSG00000136205.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TNS3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TNS3	ENSG00000136205.16	0.56	0.57	0.56	ENCSR000AEF
HepG2	TNS3	ENSG00000136205.16	42.18	34.10	38.14	ENCSR985KAT
K562	TNS3	ENSG00000136205.16	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TNS3 is not avaliable on ENCORE database.

Proteins bound to RNA

TNS3 RNA is bound by 60 proteins.

CanvasJS.com

eCLIP assay for TNS3 is not avaliable on ENCORE database.

60 proteins are bound to TNS3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	47451284	47451326	-	CDS,intron-Distal,intron-Proximal	4.10855	53.56002	HepG2	PRPF8
chr7	47525450	47525582	-	intron-Distal	6.07507	34.09599	HepG2	HNRNPL
chr7	47409247	47409309	-	intron-Distal,intron-Proximal	6.39798	34.03209	HepG2	SF3A3
chr7	47317353	47317464	-	3'-UTR,intron-Distal	5.09544	31.39305	HepG2	UPF1
chr7	47540644	47540766	-	intron-Distal	5.11849	29.52850	HepG2	PTBP1
chr7	47621151	47621307	-	5'-UTR,intron-Distal,intron-Proximal	4.59540	28.63899	HepG2	CSTF2T
chr7	47525409	47525539	-	intron-Distal	5.76007	28.16257	HepG2	AGGF1
chr7	47316926	47317090	-	3'-UTR,intron-Distal	4.96872	27.90143	HepG2	UPF1
chr7	47600367	47600403	-	intron-Distal	7.31246	27.21222	HepG2	XPO5
chr7	47520602	47520689	-	intron-Distal,intron-Proximal	6.72579	27.10851	HepG2	TIAL1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 417 entries

eCLIP assay for TNS3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TNS3 is not available on ENCORE database.
71 RBPs can affect the levels of TNS3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TNS3 is not available on ENCORE database.

71 RBPs can affect the gene expression of TNS3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TNS3	ENSG00000136205.12	1805.01430	5963.28000	-1.72410	38.89900	37.22270	HepG2	AKAP1
TNS3	ENSG00000136205.12	6257.55170	3697.28140	0.75900	29.82430	28.02740	HepG2	SRSF7
TNS3	ENSG00000136205.12	6406.38880	3763.15960	0.76750	29.78210	27.82790	HepG2	HNRNPF
TNS3	ENSG00000136205.12	2553.90440	4023.35260	-0.65570	26.77470	25.08070	HepG2	ZC3H8
TNS3	ENSG00000136205.12	3558.54180	5910.07620	-0.73190	23.84310	22.62110	HepG2	RBM22
TNS3	ENSG00000136205.12	3287.98940	5002.46050	-0.60540	23.70580	22.17870	HepG2	SUCLG1
TNS3	ENSG00000136205.12	6299.15470	3705.60850	0.76530	18.95960	17.25230	HepG2	IGF2BP1
TNS3	ENSG00000136205.12	2570.90120	3499.70170	-0.44500	14.03600	12.76080	HepG2	SMN1
TNS3	ENSG00000136205.12	5689.07130	4271.79260	0.41330	13.83670	12.47460	HepG2	SLBP
TNS3	ENSG00000136205.12	3340.13790	5711.79500	-0.77400	11.59450	10.39370	HepG2	DDX3X
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TNS3 is not available on ENCORE database.

4 RBPs can affect the splicing of TNS3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	TNS3	ENSG00000136205.12	chr7	-	47384352	47384461			47384352	47384436	47384521	47384636	0.06100	0.00000	0.00008	longer	HepG2	SF3A3
MXE	TNS3	ENSG00000136205.12	chr7	-	47546504	47546542	47568633	47568745	47520700	47520739	47621648	47621742	0.25000	0.00052	0.02246	1included	HepG2	SF3A3
SE	TNS3	ENSG00000136205.12	chr7	-	47512816	47512919			47481600	47481653	47520700	47520739	0.23300	0.00200	0.07560	included	HepG2	SFPQ
SE	TNS3	ENSG00000136205.12	chr7	-	47512816	47512919			47481600	47481653	47520700	47520739	0.11300	0.00213	0.08133	included	HepG2	SF3B4
MXE	TNS3	ENSG00000136205.12	chr7	-	47481600	47481653	47520700	47520739	47479084	47479256	47546504	47546542	-0.13100	0.00397	0.09682	2included	HepG2	PCBP1

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TNS3

General Information

Functions

Localization

Domains (AlphaFold: TNS3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TNS3 is not avaliable on ENCORE database.

60 proteins are bound to TNS3 RNA:

eCLIP assay for TNS3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TNS3 is not available on ENCORE database.

71 RBPs can affect the gene expression of TNS3 :

The Knockdown/knockout RNA-Seq assay for TNS3 is not available on ENCORE database.

4 RBPs can affect the splicing of TNS3 :

The Knockdown/knockout RNA-Seq assay for TNS3 is not avaliable on ENCORE database.