TMEM18

General Information

Gene Name : TMEM18
Gene ID : ENSG00000151353.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM18)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM18	ENSG00000151353.14	12.67	17.12	14.89	ENCSR000AEF
HepG2	TMEM18	ENSG00000151353.14	29.12	37.86	33.49	ENCSR985KAT
K562	TMEM18	ENSG00000151353.14	13.87	14.68	14.27	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM18 is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM18 RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for TMEM18 is not avaliable on ENCORE database.

23 proteins are bound to TMEM18 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	677183	677261	-	intron-Distal	4.71140	28.15449	HepG2	CSTF2T
chr2	673636	673780	-	intron-Distal	6.95216	28.15000	HepG2	PCBP2
chr2	673780	673947	-	intron-Distal	5.80513	26.79427	HepG2	PCBP2
chr2	676691	676807	-	5'-UTR,intron-Distal,intron-Proximal	4.55136	19.64330	HepG2	CSTF2T
chr2	669496	669597	-	3'-UTR,CDS,intron-Distal	4.22119	16.40111	HepG2	PPIG
chr2	669490	669656	-	3'-UTR,CDS,intron-Distal	3.90839	11.62230	K562	UCHL5
chr2	675472	675557	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.60728	10.85246	HepG2	PRPF8
chr2	676647	676691	-	5'-UTR,intron-Distal,intron-Proximal	4.51722	10.78166	HepG2	CSTF2T
chr2	672766	672832	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.16437	10.51866	HepG2	PRPF8
chr2	676684	676853	-	5'-UTR,intron-Distal,intron-Proximal	4.37905	9.62219	K562	EWSR1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 47 entries

eCLIP assay for TMEM18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM18 is not available on ENCORE database.
71 RBPs can affect the levels of TMEM18.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM18 is not available on ENCORE database.

71 RBPs can affect the gene expression of TMEM18 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM18	ENSG00000151353.10	424.17400	1009.89680	-1.25150	32.12880	30.67360	HepG2	PTBP1
TMEM18	ENSG00000151353.10	440.85980	992.47360	-1.17070	28.91960	27.30850	HepG2	PCBP1
TMEM18	ENSG00000151353.10	523.28470	1097.44810	-1.06850	25.47960	24.36130	HepG2	SRSF1
TMEM18	ENSG00000151353.10	503.72810	1093.70530	-1.11850	23.21700	21.66580	HepG2	QKI
TMEM18	ENSG00000151353.10	449.42890	892.84370	-0.99030	21.30270	20.03480	HepG2	SRSF9
TMEM18	ENSG00000151353.10	640.30060	1123.90340	-0.81170	15.47620	14.39220	HepG2	NELFE
TMEM18	ENSG00000151353.10	652.60150	1051.40100	-0.68800	11.33180	10.26070	HepG2	SF3B4
TMEM18	ENSG00000151353.10	603.82790	986.46530	-0.70810	10.57910	9.59590	HepG2	TAF15
TMEM18	ENSG00000151353.10	561.30900	1067.94200	-0.92800	10.80260	9.59280	HepG2	NCBP2
TMEM18	ENSG00000151353.10	540.98840	1043.40230	-0.94760	10.39890	9.23730	HepG2	MATR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 75 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM18 is not available on ENCORE database.

9 RBPs can affect the splicing of TMEM18 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM18	ENSG00000151353.10	chr2	-	675509	675630	669756	669850	677288	677439	-0.32500	0.00000	0.00000	excluded	K562	PUS1
SE	TMEM18	ENSG00000151353.10	chr2	-	675757	676238	675509	675630	677288	677406	0.16200	0.00000	0.00050	included	K562	HNRNPU
SE	TMEM18	ENSG00000151353.10	chr2	-	672807	672862	669756	669850	677288	677439	-0.21400	0.00000	0.00030	excluded	K562	AGGF1
SE	TMEM18	ENSG00000151353.10	chr2	-	675509	675630	669756	669850	677288	677439	-0.08900	0.00010	0.00423	excluded	K562	RBM15
SE	TMEM18	ENSG00000151353.10	chr2	-	675509	675630	669756	669850	677288	677439	-0.08100	0.00013	0.00641	excluded	K562	AKAP8L
SE	TMEM18	ENSG00000151353.10	chr2	-	675757	676238	675509	675630	677288	677406	-0.15200	0.00019	0.03413	excluded	K562	MATR3
SE	TMEM18	ENSG00000151353.10	chr2	-	675757	676238	675509	675630	677288	677406	-0.06100	0.00049	0.06931	excluded	K562	ZC3H8
SE	TMEM18	ENSG00000151353.10	chr2	-	672807	672862	669756	669850	677288	677406	-0.12900	0.00110	0.03680	excluded	K562	UTP18
SE	TMEM18	ENSG00000151353.10	chr2	-	675757	676238	675509	675630	677288	677406	-0.11800	0.00476	0.07305	excluded	K562	SRSF1

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM18

General Information

Functions

Localization

Domains (AlphaFold: TMEM18)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM18 is not avaliable on ENCORE database.

23 proteins are bound to TMEM18 RNA:

eCLIP assay for TMEM18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM18 is not available on ENCORE database.

71 RBPs can affect the gene expression of TMEM18 :

The Knockdown/knockout RNA-Seq assay for TMEM18 is not available on ENCORE database.

9 RBPs can affect the splicing of TMEM18 :

The Knockdown/knockout RNA-Seq assay for TMEM18 is not avaliable on ENCORE database.