TMEM161A

General Information

Gene Name : TMEM161A
Gene ID : ENSG00000064545.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM161A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM161A	ENSG00000064545.14	0.50	5.00	2.75	ENCSR000AEF
HepG2	TMEM161A	ENSG00000064545.14	28.83	7.66	18.24	ENCSR985KAT
K562	TMEM161A	ENSG00000064545.14	49.47	19.61	34.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM161A is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM161A RNA is bound by 21 proteins.

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eCLIP assay for TMEM161A is not avaliable on ENCORE database.

21 proteins are bound to TMEM161A RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	19232158	19232269	-	CDS,intron-Distal,intron-Proximal	4.17928	24.34302	HepG2	PRPF8
chr19	19243856	19243933	-	intron-Distal,intron-Proximal	6.59162	19.71511	K562	AQR
chr19	19232192	19232288	-	CDS,intron-Distal,intron-Proximal	4.86711	19.32744	HepG2	AQR
chr19	19232280	19232334	-	intron-Distal,intron-Proximal	5.48260	13.44390	HepG2	PRPF8
chr19	19249182	19249257	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.97006	13.33765	K562	PRPF8
chr19	19243933	19243939	-	intron-Distal,intron-Proximal	5.09489	12.70303	K562	AQR
chr19	19231884	19231961	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.84583	12.67119	HepG2	PPIG
chr19	19249200	19249261	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.47695	11.83008	HepG2	PRPF8
chr19	19232413	19232478	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.89594	11.11819	HepG2	PPIG
chr19	19248682	19248792	-	intron-Distal	4.12098	10.50276	K562	GTF2F1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 73 entries

eCLIP assay for TMEM161A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM161A is not available on ENCORE database.
93 RBPs can affect the levels of TMEM161A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM161A is not available on ENCORE database.

93 RBPs can affect the gene expression of TMEM161A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM161A	ENSG00000064545.10	317.66730	121.74790	1.38350	17.71450	16.20100	HepG2	DNAJC2
TMEM161A	ENSG00000064545.10	341.98010	134.32210	1.34810	16.98610	15.74800	HepG2	TRIM56
TMEM161A	ENSG00000064545.10	328.44300	122.20040	1.42630	17.00400	15.27580	HepG2	PPIL4
TMEM161A	ENSG00000064545.10	535.57110	1148.27710	-1.10030	15.94030	14.68950	K562	AQR
TMEM161A	ENSG00000064545.10	244.14180	519.64850	-1.08980	14.52830	13.62590	HepG2	SRSF1
TMEM161A	ENSG00000064545.10	476.59170	252.64350	0.91560	12.61690	11.30600	HepG2	SLBP
TMEM161A	ENSG00000064545.10	576.36800	274.48620	1.07020	12.96060	10.55450	K562	SRSF5
TMEM161A	ENSG00000064545.10	596.14220	305.04600	0.96650	12.22600	10.36670	K562	MAGOH
TMEM161A	ENSG00000064545.10	524.59770	295.82390	0.82640	11.25010	10.14030	HepG2	SUCLG1
TMEM161A	ENSG00000064545.10	664.61700	283.64490	1.22830	11.85110	10.04480	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 102 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM161A is not available on ENCORE database.

20 RBPs can affect the splicing of TMEM161A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM161A	ENSG00000064545.10	chr19	-	19245592	19245696	19243688	19244019	19249234	19249256	-0.54600	0.00000	0.00044	excluded	K562	EFTUD2
A3SS	TMEM161A	ENSG00000064545.10	chr19	-	19243938	19244115	19243938	19244019	19245592	19245696	0.22500	0.00000	0.00005	longer	K562	AGGF1
A3SS	TMEM161A	ENSG00000064545.10	chr19	-	19243160	19243364	19243160	19243317	19243465	19243563	0.14000	0.00000	0.00000	longer	K562	AQR
RI	TMEM161A	ENSG00000064545.10	chr19	-	19232116	19232477	19232116	19232230	19232333	19232477	0.34000	0.00000	0.00000	included	HepG2	RBM22
RI	TMEM161A	ENSG00000064545.10	chr19	-	19243160	19243563	19243160	19243317	19243465	19243563	0.18200	0.00000	0.00000	included	K562	AQR
SE	TMEM161A	ENSG00000064545.10	chr19	-	19243938	19244166	19243466	19243563	19249234	19249256	-0.12400	0.00001	0.00038	excluded	K562	PUS1
RI	TMEM161A	ENSG00000064545.10	chr19	-	19243160	19243563	19243160	19243317	19243465	19243563	0.11200	0.00001	0.00016	included	HepG2	SF3B4
A3SS	TMEM161A	ENSG00000064545.10	chr19	-	19243938	19244115	19243938	19244019	19245592	19245696	0.09700	0.00002	0.01126	longer	K562	DROSHA
A3SS	TMEM161A	ENSG00000064545.10	chr19	-	19243938	19244115	19243938	19244019	19245592	19245696	0.21600	0.00002	0.00160	longer	K562	PUS1
RI	TMEM161A	ENSG00000064545.10	chr19	-	19243160	19243563	19243160	19243317	19243465	19243563	0.16900	0.00002	0.00034	included	K562	EFTUD2

Showing 1 to 10 of 33 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM161A

General Information

Functions

Localization

Domains (AlphaFold: TMEM161A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM161A is not avaliable on ENCORE database.

21 proteins are bound to TMEM161A RNA:

eCLIP assay for TMEM161A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM161A is not available on ENCORE database.

93 RBPs can affect the gene expression of TMEM161A :

The Knockdown/knockout RNA-Seq assay for TMEM161A is not available on ENCORE database.

20 RBPs can affect the splicing of TMEM161A :

The Knockdown/knockout RNA-Seq assay for TMEM161A is not avaliable on ENCORE database.