THOC2

General Information

Gene Name : THOC2
Gene ID : ENSG00000125676.19
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: THOC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	THOC2	ENSG00000125676.19	72.28	66.03	69.16	ENCSR000AEF
HepG2	THOC2	ENSG00000125676.19	36.13	71.35	53.74	ENCSR985KAT
K562	THOC2	ENSG00000125676.19	113.12	128.96	121.04	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for THOC2 is not avaliable on ENCORE database.

Proteins bound to RNA

THOC2 RNA is bound by 47 proteins.

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eCLIP assay for THOC2 is not avaliable on ENCORE database.

47 proteins are bound to THOC2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	122735187	122735342	-	3'-UTR,intron-Distal	5.36081	62.90494	K562	PTBP1
chrX	122756954	122756994	-	CDS,intron-Distal,intron-Proximal	3.99384	48.01254	K562	UCHL5
chrX	122756668	122756712	-	CDS,intron-Distal,intron-Proximal	4.36070	40.97860	K562	UCHL5
chrX	122756957	122756990	-	CDS,intron-Distal,intron-Proximal	4.89483	40.74880	K562	ZNF622
chrX	122745341	122745379	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.85478	38.19901	K562	SF3B4
chrX	122755011	122755105	-	CDS,intron-Distal,intron-Proximal	5.38292	37.15623	K562	UCHL5
chrX	122756670	122756711	-	CDS,intron-Distal,intron-Proximal	5.26037	34.76878	K562	ZNF622
chrX	122801014	122801103	-	CDS,intron-Distal	6.10058	31.38531	HepG2	BCLAF1
chrX	122758395	122758476	-	CDS,intron-Distal,intron-Proximal	4.75814	29.36211	HepG2	BCLAF1
chrX	122757923	122757961	-	CDS,intron-Distal	4.20430	28.97560	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 335 entries

eCLIP assay for THOC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for THOC2 is not available on ENCORE database.
115 RBPs can affect the levels of THOC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for THOC2 is not available on ENCORE database.

115 RBPs can affect the gene expression of THOC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
THOC2	ENSG00000125676.15	2321.16720	4512.78170	-0.95920	62.08630	60.38460	HepG2	ZNF622
THOC2	ENSG00000125676.15	1375.62370	2778.62860	-1.01430	29.29190	27.98030	HepG2	TIAL1
THOC2	ENSG00000125676.15	3204.49510	5060.95180	-0.65930	21.21640	19.81610	HepG2	ETF1
THOC2	ENSG00000125676.15	2220.84900	3446.16810	-0.63390	20.42690	18.98840	HepG2	CKAP4
THOC2	ENSG00000125676.15	1936.58680	4626.77700	-1.25650	20.00200	18.14520	HepG2	SF3A3
THOC2	ENSG00000125676.15	2784.38980	4148.27620	-0.57520	17.80060	16.73810	HepG2	SSB
THOC2	ENSG00000125676.15	2017.03050	3543.60700	-0.81300	17.37980	16.05800	HepG2	PUF60
THOC2	ENSG00000125676.15	2382.39880	3510.62240	-0.55930	17.34030	16.03250	HepG2	PUS1
THOC2	ENSG00000125676.15	4905.44960	7450.74660	-0.60300	17.54760	15.64310	K562	SF3A3
THOC2	ENSG00000125676.15	1906.65470	2859.43320	-0.58470	16.10100	14.73530	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 135 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for THOC2 is not available on ENCORE database.

25 RBPs can affect the splicing of THOC2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	THOC2	ENSG00000125676.15	chrX	-	122837303	122837355	122831575	122831601	122840707	122840799	-0.20500	0.00003	excluded	K562	SF3B4
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747407	122745290	122745367	122747489	122747559	-0.22500	0.00000	excluded	HepG2	U2AF1
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747407	122745290	122745367	122747489	122747559	-0.35900	0.00000	excluded	HepG2	U2AF2
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747436	122745350	122745367	122747489	122747559	-0.07300	0.00000	excluded	K562	PUS1
SE	THOC2	ENSG00000125676.15	chrX	-	122757494	122757560	122756955	122757134	122757637	122757822	0.11300	0.00151	included	K562	KHSRP
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747407	122745290	122745367	122747489	122747559	-0.16800	0.00000	excluded	K562	U2AF1
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747407	122745290	122745367	122747489	122747559	-0.05300	0.00056	excluded	K562	HNRNPL
SE	THOC2	ENSG00000125676.15	chrX	-	122747249	122747407	122745290	122745367	122747489	122747559	-0.42600	0.00000	excluded	K562	U2AF2
SE	THOC2	ENSG00000125676.15	chrX	-	122757494	122757560	122756955	122757134	122757637	122757822	0.25800	0.00000	included	K562	HNRNPU
SE	THOC2	ENSG00000125676.15	chrX	-	122757494	122757560	122756955	122757134	122757637	122757822	0.33700	0.00006	included	HepG2	SRSF9

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

THOC2

General Information

Functions

Localization

Domains (AlphaFold: THOC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for THOC2 is not avaliable on ENCORE database.

47 proteins are bound to THOC2 RNA:

eCLIP assay for THOC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for THOC2 is not available on ENCORE database.

115 RBPs can affect the gene expression of THOC2 :

The Knockdown/knockout RNA-Seq assay for THOC2 is not available on ENCORE database.

25 RBPs can affect the splicing of THOC2 :

The Knockdown/knockout RNA-Seq assay for THOC2 is not avaliable on ENCORE database.