SARDH

General Information

Gene Name : SARDH
Gene ID : ENSG00000123453.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SARDH)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SARDH	ENSG00000123453.17	0.00	0.02	0.01	ENCSR000AEF
HepG2	SARDH	ENSG00000123453.17	25.36	8.20	16.78	ENCSR985KAT
K562	SARDH	ENSG00000123453.17	0.00	0.02	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SARDH is not avaliable on ENCORE database.

Proteins bound to RNA

SARDH RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for SARDH is not avaliable on ENCORE database.

29 proteins are bound to SARDH RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	136533310	136533442	-	intron-Distal	7.16927	43.93098	HepG2	CSTF2T
chr9	136534643	136534726	-	intron-Distal	5.31622	29.97783	HepG2	CSTF2T
chr9	136533326	136533434	-	intron-Distal	7.52882	29.07147	HepG2	FAM120A
chr9	136534856	136534925	-	intron-Distal	5.68762	27.29416	HepG2	CSTF2T
chr9	136534553	136534614	-	intron-Distal	6.31247	22.07234	HepG2	CSTF2T
chr9	136534614	136534638	-	intron-Distal	5.38078	21.41391	HepG2	CSTF2T
chr9	136594077	136594199	-	intron-Distal	4.99432	19.12126	HepG2	PCBP2
chr9	136534539	136534704	-	intron-Distal	5.18529	15.88741	HepG2	FASTKD2
chr9	136534798	136534854	-	intron-Distal	5.71151	15.39233	HepG2	CSTF2T
chr9	136570068	136570094	-	CDS,intron-Distal,intron-Proximal	4.84783	15.11472	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 168 entries

eCLIP assay for SARDH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SARDH is not available on ENCORE database.
107 RBPs can affect the levels of SARDH.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SARDH is not available on ENCORE database.

107 RBPs can affect the gene expression of SARDH :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SARDH	ENSG00000123453.12	346.42170	1509.81900	-2.12380	55.06040	53.56630	HepG2	SRFBP1
SARDH	ENSG00000123453.12	1356.88000	376.95000	1.84770	50.37370	48.73710	HepG2	TIAL1
SARDH	ENSG00000123453.12	2820.28280	1310.80120	1.10530	50.16850	48.65240	HepG2	SSB
SARDH	ENSG00000123453.12	1339.03830	437.08290	1.61510	45.74590	43.40720	HepG2	IGF2BP1
SARDH	ENSG00000123453.12	391.96810	1336.79820	-1.77000	42.37980	40.82200	HepG2	RBM22
SARDH	ENSG00000123453.12	979.97640	206.76500	2.24470	38.15310	35.36500	HepG2	RPS3A
SARDH	ENSG00000123453.12	464.90050	1369.67430	-1.55880	36.49160	34.75380	HepG2	TAF15
SARDH	ENSG00000123453.12	663.22420	1459.66480	-1.13810	33.02450	31.38830	HepG2	SF3B4
SARDH	ENSG00000123453.12	434.01070	1180.89140	-1.44410	32.70380	31.16730	HepG2	ACO1
SARDH	ENSG00000123453.12	543.50830	1239.61190	-1.18950	32.48350	30.99740	HepG2	SRSF9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SARDH is not available on ENCORE database.

5 RBPs can affect the splicing of SARDH :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SARDH	ENSG00000123453.12	chr9	-	136578477	136578635			136578159	136578246	136582447	136582577	0.09500	0.00000	0.00004	included	HepG2	SSB
MXE	SARDH	ENSG00000123453.12	chr9	-	136578477	136578635	136581023	136581110	136578159	136578246	136582447	136582577	-0.53500	0.00000	0.00005	2included	HepG2	SSB
SE	SARDH	ENSG00000123453.12	chr9	-	136581023	136581110			136578159	136578246	136582447	136582577	0.29200	0.00001	0.00135	included	HepG2	RBM22
A3SS	SARDH	ENSG00000123453.12	chr9	-	136582447	136582675			136582447	136582577	136584059	136584164	0.08700	0.00013	0.01416	longer	HepG2	SF3B4
A3SS	SARDH	ENSG00000123453.12	chr9	-	136582447	136582675			136582447	136582577	136584059	136584164	0.06600	0.00038	0.08320	longer	HepG2	MATR3
A3SS	SARDH	ENSG00000123453.12	chr9	-	136582447	136582675			136582447	136582577	136584059	136584164	0.11900	0.00115	0.04520	longer	HepG2	U2AF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SARDH

General Information

Functions

Localization

Domains (AlphaFold: SARDH)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SARDH is not avaliable on ENCORE database.

29 proteins are bound to SARDH RNA:

eCLIP assay for SARDH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SARDH is not available on ENCORE database.

107 RBPs can affect the gene expression of SARDH :

The Knockdown/knockout RNA-Seq assay for SARDH is not available on ENCORE database.

5 RBPs can affect the splicing of SARDH :

The Knockdown/knockout RNA-Seq assay for SARDH is not avaliable on ENCORE database.