RHOT2

General Information

Gene Name : RHOT2
Gene ID : ENSG00000140983.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RHOT2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RHOT2	ENSG00000140983.13	5.92	30.15	18.04	ENCSR000AEF
HepG2	RHOT2	ENSG00000140983.13	78.96	21.15	50.05	ENCSR985KAT
K562	RHOT2	ENSG00000140983.13	100.26	75.61	87.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RHOT2 is not avaliable on ENCORE database.

Proteins bound to RNA

RHOT2 RNA is bound by 38 proteins.

CanvasJS.com

eCLIP assay for RHOT2 is not avaliable on ENCORE database.

38 proteins are bound to RHOT2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	720139	720176	+	3'-UTR,CDS,intron-Proximal	5.55393	68.26877	K562	DDX24
chr16	721015	721101	+	3'-UTR,CDS,intron-Proximal	5.16027	60.35484	K562	DDX24
chr16	720120	720139	+	3'-UTR,CDS,intron-Proximal	4.54395	47.75159	K562	DDX24
chr16	720484	720537	+	3'-UTR,CDS	3.89225	42.94063	K562	DDX24
chr16	718486	718532	+	CDS,intron-Distal,intron-Proximal	5.07793	41.01483	K562	DDX24
chr16	719569	719594	+	3'-UTR,CDS,intron-Distal	4.52934	37.07498	K562	DDX24
chr16	720460	720484	+	3'-UTR,CDS	3.84730	35.77523	K562	DDX24
chr16	720965	721015	+	3'-UTR,CDS,intron-Proximal	4.68016	35.46844	K562	DDX24
chr16	722091	722172	+	CDS	4.64352	35.40565	K562	DDX24
chr16	718365	718412	+	CDS,intron-Proximal	5.14948	34.95873	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 240 entries

eCLIP assay for RHOT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RHOT2 is not available on ENCORE database.
123 RBPs can affect the levels of RHOT2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RHOT2 is not available on ENCORE database.

123 RBPs can affect the gene expression of RHOT2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RHOT2	ENSG00000140983.9	890.96480	331.63970	1.42570	40.09750	37.87640	HepG2	DNAJC2
RHOT2	ENSG00000140983.9	1464.02160	655.80950	1.15850	36.56460	34.65750	HepG2	SRSF5
RHOT2	ENSG00000140983.9	1330.56150	636.86750	1.06290	34.09930	32.19430	HepG2	SLBP
RHOT2	ENSG00000140983.9	1519.80750	745.84200	1.02680	33.73860	31.98420	HepG2	SUCLG1
RHOT2	ENSG00000140983.9	330.50830	858.50710	-1.37710	29.85720	28.27390	HepG2	TAF15
RHOT2	ENSG00000140983.9	5152.00370	3086.85890	0.73890	29.78860	28.01740	K562	AGGF1
RHOT2	ENSG00000140983.9	1065.74740	432.98270	1.29940	30.07270	27.03550	K562	SF3B4
RHOT2	ENSG00000140983.9	879.04580	332.31740	1.40330	26.34010	24.63230	HepG2	SAFB2
RHOT2	ENSG00000140983.9	2346.07150	968.87280	1.27580	21.79680	19.35180	K562	TIA1
RHOT2	ENSG00000140983.9	888.85050	365.86500	1.28050	20.25070	18.90140	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 139 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RHOT2 is not available on ENCORE database.

55 RBPs can affect the splicing of RHOT2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RHOT2	ENSG00000140983.9	chr16	+	719552	719606	718655	718699	720122	720175	-0.11800	0.00000	excluded	K562	AKAP8L
SE	RHOT2	ENSG00000140983.9	chr16	+	719552	719606	718655	718699	720122	720175	-0.08300	0.00002	excluded	K562	PUS1
SE	RHOT2	ENSG00000140983.9	chr16	+	718487	718569	718352	718411	718655	718699	-0.12400	0.00009	excluded	K562	EFTUD2
SE	RHOT2	ENSG00000140983.9	chr16	+	719552	719606	718655	718699	720122	720175	-0.10800	0.00000	excluded	K562	RBM15
SE	RHOT2	ENSG00000140983.9	chr16	+	719552	719606	718655	718699	720122	720175	-0.11400	0.00000	excluded	K562	AGGF1
SE	RHOT2	ENSG00000140983.9	chr16	+	718487	718569	718352	718411	718655	718699	-0.18500	0.00000	excluded	K562	HNRNPC
A3SS	RHOT2	ENSG00000140983.9	chr16	+	719552	720175	720122	720175	718508	718699	-0.18400	0.00000	shorter	K562	AGGF1
A3SS	RHOT2	ENSG00000140983.9	chr16	+	719552	720175	720122	720175	718508	718699	-0.18300	0.00000	shorter	K562	AKAP8L
A3SS	RHOT2	ENSG00000140983.9	chr16	+	719552	720175	720122	720175	718508	718699	-0.12100	0.00037	shorter	K562	PUS1
A3SS	RHOT2	ENSG00000140983.9	chr16	+	719552	720175	720122	720175	718508	718699	-0.15700	0.00001	shorter	K562	RBM15

Showing 1 to 10 of 202 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RHOT2

General Information

Functions

Localization

Domains (AlphaFold: RHOT2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RHOT2 is not avaliable on ENCORE database.

38 proteins are bound to RHOT2 RNA:

eCLIP assay for RHOT2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RHOT2 is not available on ENCORE database.

123 RBPs can affect the gene expression of RHOT2 :

The Knockdown/knockout RNA-Seq assay for RHOT2 is not available on ENCORE database.

55 RBPs can affect the splicing of RHOT2 :

The Knockdown/knockout RNA-Seq assay for RHOT2 is not avaliable on ENCORE database.