QSER1

General Information

Gene Name : QSER1
Gene ID : ENSG00000060749.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: QSER1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	QSER1	ENSG00000060749.15	10.48	9.80	10.14	ENCSR000AEF
HepG2	QSER1	ENSG00000060749.15	9.62	16.92	13.27	ENCSR985KAT
K562	QSER1	ENSG00000060749.15	17.78	20.21	19.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for QSER1 is not avaliable on ENCORE database.

Proteins bound to RNA

QSER1 RNA is bound by 37 proteins.

CanvasJS.com

eCLIP assay for QSER1 is not avaliable on ENCORE database.

37 proteins are bound to QSER1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	32915052	32915210	+	intron-Distal	6.82011	32.37151	K562	NONO
chr11	32915368	32915464	+	intron-Distal	4.51776	17.93089	K562	CSTF2T
chr11	32915210	32915290	+	intron-Distal	5.90968	17.64203	K562	NONO
chr11	32954486	32954607	+	CDS,intron-Distal,intron-Proximal	4.18641	14.04414	K562	IGF2BP1
chr11	32915130	32915247	+	intron-Distal	4.69666	13.62527	K562	GEMIN5
chr11	32914904	32915014	+	intron-Distal,intron-Proximal	4.35036	13.01646	K562	NONO
chr11	32915634	32915687	+	intron-Distal	4.71702	12.98075	K562	CSTF2T
chr11	32953461	32953526	+	CDS	4.63611	12.12312	K562	RBM15
chr11	32954110	32954206	+	CDS,intron-Distal	3.78386	12.09736	K562	IGF2BP1
chr11	32915288	32915368	+	intron-Distal	3.73212	11.75875	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 148 entries

eCLIP assay for QSER1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for QSER1 is not available on ENCORE database.
111 RBPs can affect the levels of QSER1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for QSER1 is not available on ENCORE database.

111 RBPs can affect the gene expression of QSER1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
QSER1	ENSG00000060749.10	573.47880	1672.25340	-1.54400	37.86170	36.01260	HepG2	HNRNPA1
QSER1	ENSG00000060749.10	657.92460	1795.64000	-1.44850	35.86430	34.43580	HepG2	TIAL1
QSER1	ENSG00000060749.10	2582.31540	1382.11820	0.90170	33.16280	31.92330	HepG2	SRSF1
QSER1	ENSG00000060749.10	2521.79140	1242.45080	1.02120	33.37190	31.70310	HepG2	TAF15
QSER1	ENSG00000060749.10	1798.56760	3569.80120	-0.98900	21.87240	19.63280	K562	GRSF1
QSER1	ENSG00000060749.10	1851.86610	1124.47300	0.71960	20.15290	18.91320	HepG2	SRSF9
QSER1	ENSG00000060749.10	1473.96650	2419.23000	-0.71480	18.45470	17.10960	K562	AGGF1
QSER1	ENSG00000060749.10	558.22790	1260.68600	-1.17530	17.91380	16.49410	HepG2	EIF2S1
QSER1	ENSG00000060749.10	1208.46510	1855.46420	-0.61860	17.10960	15.56320	HepG2	HNRNPL
QSER1	ENSG00000060749.10	1387.22290	2517.26650	-0.85970	16.54620	14.70800	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 133 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for QSER1 is not available on ENCORE database.

2 RBPs can affect the splicing of QSER1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A5SS	QSER1	ENSG00000060749.10	chr11	+	32914805	32915051			32914805	32914880	32948702	32948815	0.21100	0.00086	0.06847	longer	K562	RBM15
MXE	QSER1	ENSG00000060749.10	chr11	+	32994918	32995095	32996793	32996889	32990591	32990689	32997879	32997999	0.05600	0.01172	0.07199	1included	K562	AQR

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

QSER1

General Information

Functions

Localization

Domains (AlphaFold: QSER1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for QSER1 is not avaliable on ENCORE database.

37 proteins are bound to QSER1 RNA:

eCLIP assay for QSER1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for QSER1 is not available on ENCORE database.

111 RBPs can affect the gene expression of QSER1 :

The Knockdown/knockout RNA-Seq assay for QSER1 is not available on ENCORE database.

2 RBPs can affect the splicing of QSER1 :

The Knockdown/knockout RNA-Seq assay for QSER1 is not avaliable on ENCORE database.