PARD3

General Information

Gene Name : PARD3
Gene ID : ENSG00000148498.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PARD3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PARD3	ENSG00000148498.15	13.72	13.13	13.43	ENCSR000AEF
HepG2	PARD3	ENSG00000148498.15	28.83	39.45	34.14	ENCSR985KAT
K562	PARD3	ENSG00000148498.15	6.72	6.63	6.67	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PARD3 is not avaliable on ENCORE database.

Proteins bound to RNA

PARD3 RNA is bound by 39 proteins.

CanvasJS.com

eCLIP assay for PARD3 is not avaliable on ENCORE database.

39 proteins are bound to PARD3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	34950386	34950438	-	intron-Distal	5.77819	38.61536	HepG2	QKI
chr10	35034245	35034418	-	intron-Distal	5.35288	38.46272	HepG2	PTBP1
chr10	34751737	34751851	-	intron-Distal	6.42186	35.51254	HepG2	PCBP2
chr10	34983027	34983086	-	intron-Distal	5.64735	32.07338	HepG2	PTBP1
chr10	34950438	34950460	-	intron-Distal	4.92873	30.26798	HepG2	QKI
chr10	34979516	34979591	-	intron-Distal	4.97807	28.74184	HepG2	HNRNPM
chr10	35080216	35080315	-	intron-Distal	5.18280	26.64516	HepG2	HNRNPM
chr10	35103921	35104030	-	5'-UTR,CDS,intron-Distal	4.21888	23.82117	HepG2	DDX3X
chr10	34950460	34950469	-	intron-Distal	4.71419	20.82115	HepG2	QKI
chr10	34885935	34886045	-	intron-Distal	5.57107	19.46246	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 234 entries

eCLIP assay for PARD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PARD3 is not available on ENCORE database.
57 RBPs can affect the levels of PARD3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PARD3 is not available on ENCORE database.

57 RBPs can affect the gene expression of PARD3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PARD3	ENSG00000148498.11	809.83030	2262.67030	-1.48230	32.03230	30.15800	HepG2	DDX3X
PARD3	ENSG00000148498.11	651.69850	1421.66930	-1.12530	21.92710	20.26330	HepG2	DDX21
PARD3	ENSG00000148498.11	995.33630	2145.22610	-1.10790	18.10380	16.57760	HepG2	NCBP2
PARD3	ENSG00000148498.11	3145.71450	2274.45410	0.46780	11.28420	10.45780	HepG2	SRFBP1
PARD3	ENSG00000148498.11	1430.33890	1974.70980	-0.46530	9.22840	8.39810	HepG2	SSB
PARD3	ENSG00000148498.11	962.97400	1802.19740	-0.90420	9.00920	7.73780	HepG2	SF3A3
PARD3	ENSG00000148498.11	1569.01650	2154.87540	-0.45770	8.31260	7.46660	HepG2	NELFE
PARD3	ENSG00000148498.11	1228.45240	1845.60860	-0.58730	7.71440	6.78660	HepG2	PUF60
PARD3	ENSG00000148498.11	1302.57460	2084.22980	-0.67810	7.77280	6.68810	HepG2	MAGOH
PARD3	ENSG00000148498.11	787.37470	1217.21030	-0.62850	7.32390	6.34770	HepG2	HNRNPA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 61 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PARD3 is not available on ENCORE database.

29 RBPs can affect the splicing of PARD3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PARD3	ENSG00000148498.11	chr10	-	34663801	34663930	34648998	34649187	34666894	34667034	-0.23500	0.00000	0.00016	excluded	HepG2	U2AF1
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.37700	0.00000	0.00078	included	HepG2	HNRNPA1
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.23800	0.00000	0.00025	included	HepG2	LARP4
SE	PARD3	ENSG00000148498.11	chr10	-	34591256	34591357	34573062	34573173	34606034	34606266	0.09100	0.00000	0.00018	included	HepG2	SF3A3
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.36200	0.00000	0.00000	included	HepG2	IGF2BP3
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.36400	0.00000	0.00000	included	HepG2	PCBP1
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.55700	0.00000	0.00000	included	HepG2	HNRNPU
A5SS	PARD3	ENSG00000148498.11	chr10	-	34626202	34626354	34626292	34626354	34625126	34625171	-0.48900	0.00000	0.00000	shorter	HepG2	SRSF1
SE	PARD3	ENSG00000148498.11	chr10	-	34739244	34739376	34690753	34690845	34759012	34759191	0.24400	0.00001	0.00092	included	HepG2	SFPQ
SE	PARD3	ENSG00000148498.11	chr10	-	34661425	34661464	34648998	34649187	34663801	34663930	0.23700	0.00002	0.01183	included	HepG2	XPO5

Showing 1 to 10 of 38 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PARD3

General Information

Functions

Localization

Domains (AlphaFold: PARD3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PARD3 is not avaliable on ENCORE database.

39 proteins are bound to PARD3 RNA:

eCLIP assay for PARD3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PARD3 is not available on ENCORE database.

57 RBPs can affect the gene expression of PARD3 :

The Knockdown/knockout RNA-Seq assay for PARD3 is not available on ENCORE database.

29 RBPs can affect the splicing of PARD3 :

The Knockdown/knockout RNA-Seq assay for PARD3 is not avaliable on ENCORE database.