NCAPD2

General Information

Gene Name : NCAPD2
Gene ID : ENSG00000010292.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NCAPD2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NCAPD2	ENSG00000010292.12	69.47	99.36	84.41	ENCSR000AEF
HepG2	NCAPD2	ENSG00000010292.12	74.43	77.90	76.17	ENCSR985KAT
K562	NCAPD2	ENSG00000010292.12	68.90	63.05	65.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NCAPD2 is not avaliable on ENCORE database.

Proteins bound to RNA

NCAPD2 RNA is bound by 51 proteins.

CanvasJS.com

eCLIP assay for NCAPD2 is not avaliable on ENCORE database.

51 proteins are bound to NCAPD2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	6619516	6619529	+	intron-Distal	4.90726	400.00000	K562	SMNDC1
chr12	6619643	6619653	+	intron-Distal	6.76425	400.00000	K562	SMNDC1
chr12	6619707	6619710	+	intron-Distal,intron-Proximal	5.04856	400.00000	HepG2	PTBP1
chr12	6619599	6619613	+	intron-Distal	3.85073	400.00000	K562	AATF
chr12	6619468	6619479	+	intron-Distal	6.34106	400.00000	HepG2	DKC1
chr12	6619596	6619606	+	intron-Distal	5.11788	400.00000	HepG2	SF3A3
chr12	6619677	6619683	+	intron-Distal	6.25065	400.00000	HepG2	SF3A3
chr12	6619675	6619677	+	intron-Distal	7.91713	400.00000	HepG2	DKC1
chr12	6619408	6619426	+	intron-Distal	3.68297	400.00000	HepG2	PTBP1
chr12	6619610	6619617	+	intron-Distal	5.75839	400.00000	K562	SMNDC1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 337 entries

eCLIP assay for NCAPD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NCAPD2 is not available on ENCORE database.
175 RBPs can affect the levels of NCAPD2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NCAPD2 is not available on ENCORE database.

175 RBPs can affect the gene expression of NCAPD2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NCAPD2	ENSG00000010292.8	1785.97030	6683.01340	-1.90380	199.40270	196.90760	HepG2	SRFBP1
NCAPD2	ENSG00000010292.8	1274.81210	5916.99240	-2.21460	173.70690	170.96070	HepG2	RBM22
NCAPD2	ENSG00000010292.8	1199.29090	3718.53550	-1.63260	101.31600	99.30870	HepG2	ZNF622
NCAPD2	ENSG00000010292.8	1156.96110	4005.83540	-1.79180	90.27400	88.18170	HepG2	TIAL1
NCAPD2	ENSG00000010292.8	1694.37200	4029.56270	-1.24990	88.67830	86.23730	HepG2	CKAP4
NCAPD2	ENSG00000010292.8	1587.56290	4041.77530	-1.34820	82.85190	80.39310	HepG2	TRIM56
NCAPD2	ENSG00000010292.8	3137.03970	7079.31700	-1.17420	71.76230	69.49620	HepG2	ETF1
NCAPD2	ENSG00000010292.8	788.85130	3631.79990	-2.20290	71.56380	69.17770	HepG2	SUPV3L1
NCAPD2	ENSG00000010292.8	2807.57230	6165.90600	-1.13500	63.68610	61.23350	HepG2	AUH
NCAPD2	ENSG00000010292.8	1448.37300	3264.29330	-1.17230	59.29170	57.08480	HepG2	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 206 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NCAPD2 is not available on ENCORE database.

17 RBPs can affect the splicing of NCAPD2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NCAPD2	ENSG00000010292.8	chr12	+	6619240	6619299	6604241	6604391	6619794	6619886	-0.10700	0.00000	0.00000	excluded	K562	PUS1
SE	NCAPD2	ENSG00000010292.8	chr12	+	6619240	6619299	6604241	6604391	6619794	6619886	-0.07800	0.00000	0.00003	excluded	K562	RBM15
A3SS	NCAPD2	ENSG00000010292.8	chr12	+	6637118	6637233	6637133	6637233	6636942	6637054	0.13900	0.00000	0.00000	longer	HepG2	SF3A3
A3SS	NCAPD2	ENSG00000010292.8	chr12	+	6626505	6626665	6626530	6626665	6625993	6626191	0.08200	0.00000	0.00000	longer	K562	AQR
RI	NCAPD2	ENSG00000010292.8	chr12	+	6623430	6623753	6623430	6623558	6623629	6623753	0.06400	0.00000	0.00000	included	K562	PUS1
RI	NCAPD2	ENSG00000010292.8	chr12	+	6623430	6623753	6623430	6623558	6623629	6623753	0.33000	0.00000	0.00000	included	HepG2	U2AF2
RI	NCAPD2	ENSG00000010292.8	chr12	+	6623430	6623753	6623430	6623558	6623629	6623753	0.09800	0.00000	0.00000	included	K562	AQR
SE	NCAPD2	ENSG00000010292.8	chr12	+	6619240	6619299	6604241	6604391	6619794	6619886	-0.05700	0.00001	0.00123	excluded	K562	UTP18
RI	NCAPD2	ENSG00000010292.8	chr12	+	6623430	6623753	6623430	6623558	6623629	6623753	0.07300	0.00001	0.00097	included	K562	BUD13
SE	NCAPD2	ENSG00000010292.8	chr12	+	6619240	6619299	6618882	6618958	6619794	6619886	-0.15300	0.00003	0.00062	excluded	HepG2	U2AF2

Showing 1 to 10 of 27 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NCAPD2

General Information

Functions

Localization

Domains (AlphaFold: NCAPD2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NCAPD2 is not avaliable on ENCORE database.

51 proteins are bound to NCAPD2 RNA:

eCLIP assay for NCAPD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NCAPD2 is not available on ENCORE database.

175 RBPs can affect the gene expression of NCAPD2 :

The Knockdown/knockout RNA-Seq assay for NCAPD2 is not available on ENCORE database.

17 RBPs can affect the splicing of NCAPD2 :

The Knockdown/knockout RNA-Seq assay for NCAPD2 is not avaliable on ENCORE database.