KBTBD2

General Information

Gene Name : KBTBD2
Gene ID : ENSG00000170852.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KBTBD2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KBTBD2	ENSG00000170852.10	13.72	11.51	12.62	ENCSR000AEF
HepG2	KBTBD2	ENSG00000170852.10	13.40	19.29	16.34	ENCSR985KAT
K562	KBTBD2	ENSG00000170852.10	25.45	19.57	22.51	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KBTBD2 is not avaliable on ENCORE database.

Proteins bound to RNA

KBTBD2 RNA is bound by 27 proteins.

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eCLIP assay for KBTBD2 is not avaliable on ENCORE database.

27 proteins are bound to KBTBD2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	32919184	32919236	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.35729	22.32708	K562	YBX3
chr7	32919236	32919288	-	3'-UTR,intron-Distal,intron-Proximal	5.10029	20.91609	K562	YBX3
chr7	32931235	32931313	-	5'-UTR,intron-Distal	6.18521	20.81770	HepG2	CSTF2T
chr7	32919505	32919542	-	3'-UTR,intron-Distal	4.75866	19.48182	K562	U2AF2
chr7	32919542	32919558	-	3'-UTR,intron-Distal,intron-Proximal	5.24678	19.15899	K562	U2AF2
chr7	32919509	32919564	-	3'-UTR,intron-Distal,intron-Proximal	4.19067	14.10095	K562	U2AF1
chr7	32919501	32919561	-	3'-UTR,intron-Distal,intron-Proximal	4.24125	13.84863	HepG2	U2AF2
chr7	32914743	32914786	-	CDS,intron-Distal,intron-Proximal	5.05156	13.75718	HepG2	U2AF2
chr7	32919760	32919831	-	intron-Distal	3.76251	11.77432	K562	KHSRP
chr7	32919553	32919605	-	3'-UTR,intron-Distal,intron-Proximal	6.12137	11.49904	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 64 entries

eCLIP assay for KBTBD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KBTBD2 is not available on ENCORE database.
80 RBPs can affect the levels of KBTBD2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KBTBD2 is not available on ENCORE database.

80 RBPs can affect the gene expression of KBTBD2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KBTBD2	ENSG00000170852.6	570.71650	1312.23890	-1.20120	37.56840	36.18610	HepG2	SSB
KBTBD2	ENSG00000170852.6	726.43070	1621.92460	-1.15880	35.81840	34.34350	HepG2	NELFE
KBTBD2	ENSG00000170852.6	373.11430	935.50700	-1.32610	29.00450	27.70080	HepG2	TIAL1
KBTBD2	ENSG00000170852.6	335.22080	871.33630	-1.37810	23.82110	22.24870	HepG2	HNRNPA1
KBTBD2	ENSG00000170852.6	935.62270	1583.74450	-0.75930	18.05550	17.06930	HepG2	SRSF1
KBTBD2	ENSG00000170852.6	870.59690	1432.25450	-0.71820	15.60850	14.35680	HepG2	PCBP1
KBTBD2	ENSG00000170852.6	2720.58620	1479.25530	0.87890	15.22130	13.98880	K562	PUS1
KBTBD2	ENSG00000170852.6	978.07220	1510.65000	-0.62720	12.27440	11.11560	HepG2	RECQL
KBTBD2	ENSG00000170852.6	788.65880	1506.16400	-0.93340	11.28000	10.01900	HepG2	EIF4A3
KBTBD2	ENSG00000170852.6	832.58380	1520.67460	-0.86900	11.14600	9.85920	HepG2	MAGOH
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 92 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KBTBD2 is not available on ENCORE database.

7 RBPs can affect the splicing of KBTBD2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KBTBD2	ENSG00000170852.6	chr7	-	32910419	32910548			32910419	32910492	32914603	32914769	0.11600	0.00000	0.00001	longer	K562	AQR
A5SS	KBTBD2	ENSG00000170852.6	chr7	-	32919046	32919554			32919312	32919554	32914603	32914769	-0.33300	0.00000	0.00014	shorter	K562	SRSF1
A5SS	KBTBD2	ENSG00000170852.6	chr7	-	32919046	32919554			32919312	32919554	32914603	32914769	-0.34400	0.00001	0.00097	shorter	HepG2	SRSF1
MXE	KBTBD2	ENSG00000170852.6	chr7	-	32914603	32914769	32919046	32919554	32907783	32910492	32931147	32931509	0.15800	0.00023	0.00238	1included	HepG2	U2AF2
SE	KBTBD2	ENSG00000170852.6	chr7	-	32927588	32927707			32919073	32919554	32931147	32931509	-0.15800	0.00044	0.04066	excluded	HepG2	DDX6
A5SS	KBTBD2	ENSG00000170852.6	chr7	-	32919046	32919554			32919312	32919554	32914603	32914769	-0.25100	0.00047	0.05382	shorter	K562	PTBP1
SE	KBTBD2	ENSG00000170852.6	chr7	-	32927588	32927707			32919073	32919554	32931147	32931509	0.09300	0.00067	0.01500	included	K562	SRSF1
SE	KBTBD2	ENSG00000170852.6	chr7	-	32927588	32927707			32919073	32919554	32931147	32931509	0.16000	0.00159	0.08383	included	HepG2	RBM22
SE	KBTBD2	ENSG00000170852.6	chr7	-	32927588	32927707			32919312	32919554	32931147	32931509	0.10100	0.00392	0.03814	included	K562	AQR
MXE	KBTBD2	ENSG00000170852.6	chr7	-	32914603	32914769	32919046	32919554	32907783	32910492	32931147	32931509	0.16200	0.00643	0.07894	1included	K562	SF3B4

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KBTBD2

General Information

Functions

Localization

Domains (AlphaFold: KBTBD2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KBTBD2 is not avaliable on ENCORE database.

27 proteins are bound to KBTBD2 RNA:

eCLIP assay for KBTBD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KBTBD2 is not available on ENCORE database.

80 RBPs can affect the gene expression of KBTBD2 :

The Knockdown/knockout RNA-Seq assay for KBTBD2 is not available on ENCORE database.

7 RBPs can affect the splicing of KBTBD2 :

The Knockdown/knockout RNA-Seq assay for KBTBD2 is not avaliable on ENCORE database.