INTS3

General Information

Gene Name : INTS3
Gene ID : ENSG00000143624.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: INTS3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	INTS3	ENSG00000143624.13	23.41	24.71	24.06	ENCSR000AEF
HepG2	INTS3	ENSG00000143624.13	18.26	17.94	18.10	ENCSR985KAT
K562	INTS3	ENSG00000143624.13	12.42	13.71	13.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for INTS3 is not avaliable on ENCORE database.

Proteins bound to RNA

INTS3 RNA is bound by 20 proteins.

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eCLIP assay for INTS3 is not avaliable on ENCORE database.

20 proteins are bound to INTS3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	153719830	153719901	+	5'-UTR,CDS,intron-Proximal	4.88259	29.47922	K562	PRPF8
chr1	153719816	153719899	+	5'-UTR,CDS,intron-Proximal	5.82327	27.83409	HepG2	PRPF8
chr1	153735709	153735804	+	5'-UTR,CDS	4.21207	23.11713	K562	DDX24
chr1	153719815	153719888	+	5'-UTR,CDS,intron-Proximal	6.14854	21.53361	K562	EFTUD2
chr1	153735708	153735829	+	5'-UTR,CDS,intron-Proximal	5.48199	19.90276	K562	ZNF622
chr1	153745090	153745178	+	3'-UTR,CDS,intron-Proximal	4.17766	15.90466	HepG2	U2AF2
chr1	153713129	153713210	+	5'-UTR,CDS	4.55493	15.69231	HepG2	PPIG
chr1	153746293	153746402	+	3'-UTR	5.77870	14.14125	K562	LIN28B
chr1	153736310	153736361	+	5'-UTR,CDS	6.42503	14.08939	K562	DDX24
chr1	153744272	153744365	+	3'-UTR,CDS	4.09805	13.48162	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 119 entries

eCLIP assay for INTS3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for INTS3 is not available on ENCORE database.
85 RBPs can affect the levels of INTS3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for INTS3 is not available on ENCORE database.

85 RBPs can affect the gene expression of INTS3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
INTS3	ENSG00000143624.9	757.07370	1597.71210	-1.07750	24.85710	22.94680	K562	PTBP1
INTS3	ENSG00000143624.9	2460.22090	1332.79980	0.88420	23.27180	21.71730	HepG2	QKI
INTS3	ENSG00000143624.9	2157.13460	1202.29310	0.84320	22.32560	20.95010	HepG2	TAF15
INTS3	ENSG00000143624.9	3723.12210	2379.10480	0.64600	18.94100	17.60390	HepG2	ETF1
INTS3	ENSG00000143624.9	2454.45670	1157.85340	1.08390	18.96330	17.51010	HepG2	EIF2S1
INTS3	ENSG00000143624.9	810.72400	1566.34480	-0.95010	19.04350	17.20540	K562	SRSF1
INTS3	ENSG00000143624.9	2237.74880	1245.19220	0.84560	16.68690	15.30020	K562	HNRNPC
INTS3	ENSG00000143624.9	1463.93140	2112.72870	-0.52930	14.37880	13.37330	HepG2	ZNF622
INTS3	ENSG00000143624.9	2351.84180	1197.65160	0.97350	14.42940	12.96550	HepG2	G3BP1
INTS3	ENSG00000143624.9	2891.88590	1949.92430	0.56850	13.55760	12.59500	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for INTS3 is not available on ENCORE database.

28 RBPs can affect the splicing of INTS3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	INTS3	ENSG00000143624.9	chr1	+	153733495	153733585	153733302	153733394	153734045	153734152	-0.49800	0.00000	0.00000	excluded	K562	SRSF1
SE	INTS3	ENSG00000143624.9	chr1	+	153744815	153744916	153744271	153744439	153745114	153745187	-0.15700	0.00000	0.00001	excluded	HepG2	U2AF1
SE	INTS3	ENSG00000143624.9	chr1	+	153744815	153744916	153744271	153744439	153745114	153745187	-0.13000	0.00000	0.00002	excluded	HepG2	U2AF2
SE	INTS3	ENSG00000143624.9	chr1	+	153726176	153726294	153724754	153724884	153727117	153727215	0.25200	0.00000	0.00010	included	K562	AGGF1
A3SS	INTS3	ENSG00000143624.9	chr1	+	153744815	153745187	153745114	153745187	153744271	153744439	-0.20700	0.00000	0.00005	shorter	HepG2	U2AF2
A3SS	INTS3	ENSG00000143624.9	chr1	+	153744815	153745187	153745114	153745187	153744271	153744439	-0.26000	0.00000	0.00010	shorter	HepG2	U2AF1
RI	INTS3	ENSG00000143624.9	chr1	+	153744815	153745187	153744815	153744916	153745114	153745187	0.10600	0.00000	0.00000	included	K562	PUS1
RI	INTS3	ENSG00000143624.9	chr1	+	153744815	153745187	153744815	153744916	153745114	153745187	0.21500	0.00000	0.00000	included	HepG2	U2AF2
SE	INTS3	ENSG00000143624.9	chr1	+	153733495	153733585	153733302	153733394	153734045	153734152	-0.26500	0.00001	0.00346	excluded	HepG2	DKC1
SE	INTS3	ENSG00000143624.9	chr1	+	153733495	153733585	153733302	153733394	153734045	153734152	-0.34700	0.00001	0.00095	excluded	K562	EFTUD2

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

INTS3

General Information

Functions

Localization

Domains (AlphaFold: INTS3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for INTS3 is not avaliable on ENCORE database.

20 proteins are bound to INTS3 RNA:

eCLIP assay for INTS3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for INTS3 is not available on ENCORE database.

85 RBPs can affect the gene expression of INTS3 :

The Knockdown/knockout RNA-Seq assay for INTS3 is not available on ENCORE database.

28 RBPs can affect the splicing of INTS3 :

The Knockdown/knockout RNA-Seq assay for INTS3 is not avaliable on ENCORE database.