BTN3A1

General Information

Gene Name : BTN3A1
Gene ID : ENSG00000026950.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BTN3A1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BTN3A1	ENSG00000026950.16	16.83	15.50	16.16	ENCSR000AEF
HepG2	BTN3A1	ENSG00000026950.16	6.96	8.91	7.94	ENCSR985KAT
K562	BTN3A1	ENSG00000026950.16	3.01	3.17	3.09	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BTN3A1 is not avaliable on ENCORE database.

Proteins bound to RNA

BTN3A1 RNA is bound by 4 proteins.

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eCLIP assay for BTN3A1 is not avaliable on ENCORE database.

4 proteins are bound to BTN3A1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	26408206	26408296	+	intron-Distal,intron-Proximal	4.16169	6.10859	HepG2	EFTUD2
chr6	26409689	26409762	+	CDS,intron-Proximal	4.35798	3.98427	HepG2	SF3B4
chr6	26407376	26407424	+	intron-Distal	3.29632	3.32861	HepG2	U2AF2
chr6	26404903	26404960	+	intron-Distal	3.98542	3.21228	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for BTN3A1 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for BTN3A1 is not available on ENCORE database.
132 RBPs can affect the levels of BTN3A1.

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The Knockdown/knockout RNA-Seq assay for BTN3A1 is not available on ENCORE database.

132 RBPs can affect the gene expression of BTN3A1 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BTN3A1	ENSG00000026950.12	964.94360	257.95060	1.90320	62.15290	59.45270	K562	UPF1
BTN3A1	ENSG00000026950.12	496.65190	159.95800	1.63440	23.78300	21.44870	K562	CPSF6
BTN3A1	ENSG00000026950.12	566.42510	150.46530	1.91240	19.83890	17.50620	K562	BOP1
BTN3A1	ENSG00000026950.12	220.50830	635.42370	-1.52690	18.51700	17.00150	HepG2	MATR3
BTN3A1	ENSG00000026950.12	799.68590	421.71100	0.92310	18.08590	16.64610	HepG2	SAFB2
BTN3A1	ENSG00000026950.12	495.99460	152.69670	1.69960	16.80850	14.79070	K562	GPKOW
BTN3A1	ENSG00000026950.12	1120.43760	614.36070	0.86680	17.15510	14.66100	K562	ATP5C1
BTN3A1	ENSG00000026950.12	426.83080	178.61740	1.25670	16.14590	14.62070	K562	EIF2S2
BTN3A1	ENSG00000026950.12	487.12040	180.06860	1.43560	16.46200	14.02000	K562	TIAL1
BTN3A1	ENSG00000026950.12	336.73480	657.30000	-0.96490	15.21080	13.91320	HepG2	SRSF5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 156 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BTN3A1

General Information

Functions

Localization

Domains (AlphaFold: BTN3A1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BTN3A1 is not avaliable on ENCORE database.

4 proteins are bound to BTN3A1 RNA:

eCLIP assay for BTN3A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BTN3A1 is not available on ENCORE database.

132 RBPs can affect the gene expression of BTN3A1 :

The Knockdown/knockout RNA-Seq assay for BTN3A1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of BTN3A1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for BTN3A1 is not avaliable on ENCORE database.