VAPA

General Information

Gene Name       : VAPA
Gene ID             : ENSG00000101558.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VAPA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VAPAENSG00000101558.13167.36171.38169.37ENCSR000AEF
HepG2VAPAENSG00000101558.13134.59193.82164.20ENCSR985KAT
K562VAPAENSG00000101558.13571.03606.41588.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VAPA is not avaliable on ENCORE database.



Proteins bound to RNA
  • VAPA RNA is bound by 52 proteins.  







eCLIP assay for VAPA is not avaliable on ENCORE database.





52 proteins are bound to VAPA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1899561419956189+3'-UTR3.342698.84070K562LIN28B
chr1899545439954592+3'-UTR3.2257114.59869HepG2ZC3H11A
chr1899547069954772+3'-UTR4.697524.43128HepG2TIA1
chr1899545929954649+3'-UTR3.5536719.79545HepG2ZC3H11A
chr1899545939954611+3'-UTR4.6389758.49455K562ZC3H11A
chr1899548229954893+3'-UTR3.265294.24686HepG2CSTF2
chr1899547129954750+3'-UTR3.6149813.53478K562TIA1
chr1899546789954772+3'-UTR3.5151943.30987K562ZC3H11A
chr1899543119954364+3'-UTR3.8733781.99602K562PUM2
chr1899544629954543+3'-UTR,polyA_signal3.0799411.85341HepG2ZC3H11A
chr1899545629954597+3'-UTR4.0293213.41271K562TIA1
chr1899544129954493+3'-UTR,polyA_signal4.1942256.25277K562ZC3H11A
chr1899567069956739+3'-UTR3.869577.69621K562KHSRP
chr1899577189957771+3'-UTR3.319315.57692K562CSTF2T
chr1899550789955130+3'-UTR3.3743411.29679K562FAM120A
chr1899547459954790+3'-UTR4.3461617.40248K562LIN28B
chr1899576899957718+3'-UTR4.224573.96304K562CSTF2T
chr1899543649954404+3'-UTR5.04902400.00000K562PUM2
chr1899546699954735+3'-UTR3.97977400.00000K562PUM2
chr1899361059936215+3'-UTR,CDS,intron-Proximal4.569964.96722HepG2G3BP1
chr1899565959956699+3'-UTR4.248509.07775HepG2KHSRP
chr1899565659956625+3'-UTR3.110577.66158K562PUM2
chr1899317949931810+3'-UTR,CDS,intron-Proximal4.4031516.26710K562U2AF2
chr1899545519954601+3'-UTR3.5233055.18538K562PUM2
chr1899558819955927+3'-UTR4.5428355.97058K562PUM2
chr1899541559954229+3'-UTR,CDS5.9529418.34634K562IGF2BP1
chr1899595739959686+3'-UTR5.7188815.46130K562CSTF2T
chr1899547299954745+3'-UTR3.623397.02738K562LIN28B
chr1899548119954868+3'-UTR3.5870511.89073K562FAM120A
chr1899594289959558+3'-UTR5.236616.66488K562CPSF6
chr1899563369956413+3'-UTR3.638019.20203K562KHSRP
chr1899545909954659+3'-UTR3.148789.44231HepG2DDX55
chr1899544989954540+3'-UTR3.7999033.80855K562PABPC4
chr1899319249931996+3'-UTR,CDS,intron-Proximal3.869146.34662HepG2PRPF8
chr1899317939931838+3'-UTR,CDS,intron-Proximal3.784787.40091HepG2U2AF2
chr1899547619954787+3'-UTR3.4883013.82071K562YBX3
chr1899546019954669+3'-UTR3.14527400.00000K562PUM2
chr1899561069956174+3'-UTR3.3811516.66975K562FAM120A
chr1899318109931844+3'-UTR,CDS4.4219616.45595K562U2AF2
chr1899545629954651+3'-UTR3.706206.11047HepG2TIAL1
chr1899543089954357+3'-UTR3.021134.39578HepG2SUB1
chr1899545579954598+3'-UTR3.8729587.06171K562PABPC4
chr1899319579932003+3'-UTR,CDS,intron-Proximal3.708597.58883K562AQR
chr1899542489954342+3'-UTR4.3900430.84116K562ZC3H11A
chr1899545089954549+3'-UTR3.9524549.66194K562PUM2
chr1899545559954661+3'-UTR3.330407.45099K562APOBEC3C
chr1899543699954449+3'-UTR4.315763.83024HepG2IGF2BP1
chr1899546789954712+3'-UTR3.1779423.11147K562PABPC4
chr1899576819957790+3'-UTR3.908803.10834HepG2CSTF2
chr1899544939954541+3'-UTR5.8340355.49960K562ZC3H11A
chr1899547509954792+3'-UTR3.4205814.06506K562TIA1
chr1899545489954589+3'-UTR3.7070623.67882K562FAM120A
chr1899542419954294+3'-UTR4.499094.49293HepG2TIAL1
chr1899561749956228+3'-UTR3.3116311.88622K562FAM120A
chr1899361419936192+3'-UTR,CDS3.619857.95235K562IGF2BP1
chr1899543679954446+3'-UTR3.7128711.31039K562IGF2BP2
chr1899546959954787+3'-UTR3.101224.88619HepG2LARP4
chr1899547469954791+3'-UTR3.0291011.48028K562FAM120A
chr1899545579954593+3'-UTR4.8771459.28693K562ZC3H11A
chr1899545619954605+3'-UTR4.228473.84520HepG2TIA1
chr1899543759954467+3'-UTR4.5965232.70688K562IGF2BP1
chr1899546179954669+3'-UTR4.8017652.75781K562ZC3H11A
chr1899593319959403+3'-UTR3.560866.16549HepG2U2AF2
chr1899546829954797+3'-UTR3.3004213.36655K562IGF2BP1
chr1899561899956288+3'-UTR3.6775612.46426K562LIN28B
chr1899567339956802+3'-UTR4.625475.07255HepG2KHSRP
chr1899581759958221+3'-UTR4.174113.77802HepG2U2AF2
chr1899545439954557+3'-UTR5.3018124.80831K562ZC3H11A
chr1899544069954463+3'-UTR4.96894400.00000K562PUM2
chr1899542479954365+3'-UTR3.1500023.50534K562TIA1
chr1899559619955984+3'-UTR3.090743.10157K562IGF2BP1
chr1899361049936212+3'-UTR,CDS,intron-Proximal3.205376.24568K562PUM1
chr1899140229914137+5'-UTR3.115476.27353HepG2GRWD1
chr1899142069914238+5'-UTR3.0264311.37277K562DDX3X
chr1899141449914206+5'-UTR4.2090340.56983K562DDX3X
chr1899142079914241+5'-UTR4.5638127.32401K562YBX3
chr1899140189914056+5'-UTR3.478733.65203K562FMR1
chr1899142049914207+5'-UTR4.8148631.95411K562YBX3
chr1899140239914123+5'-UTR5.3831335.09593HepG2DDX3X
chr1899141499914199+5'-UTR3.469525.08552K562GEMIN5
chr1899142269914313+5'-UTR,CDS3.3534810.34640HepG2DDX3X
chr1899142089914228+5'-UTR3.068096.13914K562IGF2BP2
chr1899142419914245+5'-UTR4.8150033.11109K562YBX3
chr1899141239914226+5'-UTR4.1135026.65290HepG2DDX3X
chr1899140369914124+5'-UTR4.8453460.47621K562DDX3X
chr1899140339914118+5'-UTR3.9971313.05817HepG2NCBP2
chr1899141149914148+5'-UTR4.271948.53508K562FXR2
chr1899505469950567+CDS,intron-Proximal3.373984.57537K562LIN28B
chr1899361899936296+CDS,intron-Proximal3.2594211.66442K562AQR
chr1899541669954170+CDS4.2118123.96855K562YBX3
chr1899143249914360+CDS,intron-Proximal5.4138927.15962HepG2PRPF8
chr1899505289950546+CDS3.318565.25567K562LIN28B
chr1899541799954198+CDS3.088558.30807K562YBX3
chr1899369879937012+CDS3.951538.37042K562ZNF622
chr1899361919936214+CDS,intron-Proximal3.8952712.53560K562ZNF622
chr1899504899950528+CDS3.6712310.90932K562LIN28B
chr1899361929936210+CDS3.330055.91048K562IGF2BP1
chr1899142599914324+CDS3.0562611.71162K562IGF2BP2
chr1899369829937005+CDS,intron-Proximal3.969153.11149HepG2G3BP1
chr1899143309914392+CDS,intron-Proximal4.024995.23469HepG2AQR
chr1899541279954131+CDS4.1394344.71901K562YBX3
chr1899504419950489+CDS3.082159.20206K562LIN28B
chr1899504779950509+CDS3.364906.35478K562YBX3
chr1899370059937084+CDS,intron-Proximal4.0332314.20559HepG2BCLAF1
chr1899143269914435+CDS,intron-Distal,intron-Proximal3.9238218.28690K562PRPF8
chr1899142549914299+CDS3.454926.74131K562GEMIN5
chr1899369829936987+CDS,intron-Proximal4.5661310.22656K562ZNF622
chr1899369829937006+CDS,intron-Proximal3.278375.15854K562IGF2BP1
chr1899541319954166+CDS4.3222555.88874K562YBX3
chr1899198989920008+intron-Distal3.884184.87260HepG2HNRNPM
chr1899264799926548+intron-Distal3.484294.44332K562HNRNPA1
chr1899146059914684+intron-Distal5.6503312.96345HepG2EFTUD2
chr1899508419950885+intron-Distal3.405173.54718K562PRPF8
chr1899260009926046+intron-Distal3.252269.90809K562KHSRP
chr1899149829915004+intron-Distal3.452853.84119K562EFTUD2
chr1899183079918366+intron-Distal3.371615.96357K562PTBP1
chr1899234089923453+intron-Distal3.143589.50035K562KHSRP
chr1899236569923742+intron-Distal3.812169.51999HepG2KHSRP
chr1899148529914912+intron-Distal3.921853.95426HepG2BCCIP
chr1899219709921985+intron-Distal3.819896.25184K562U2AF2
chr1899241499924174+intron-Distal4.513154.79708HepG2U2AF2
chr1899219419921960+intron-Distal3.173744.10408K562KHSRP
chr1899243249924372+intron-Distal3.314119.83419K562KHSRP
chr1899187009918784+intron-Distal3.118419.20894K562PTBP1
chr1899182089918254+intron-Distal3.199063.84589K562HNRNPL
chr1899149869915096+intron-Distal,intron-Proximal4.8312225.29014HepG2HNRNPM
chr1899453719945429+intron-Distal3.724844.03067HepG2HNRNPC
chr1899259329925970+intron-Distal3.870743.20552HepG2KHSRP
chr1899237899923830+intron-Distal3.892645.60471HepG2U2AF2
chr1899184789918575+intron-Distal4.2907213.77848K562PTBP1
chr1899244949924516+intron-Distal5.3097820.60375K562KHSRP
chr1899220519922097+intron-Distal3.102404.10517K562U2AF2
chr1899462799946335+intron-Distal3.041625.63398K562U2AF2
chr1899244419924469+intron-Distal4.9187528.58851K562KHSRP
chr1899231109923208+intron-Distal3.1597513.96762K562KHSRP
chr1899145449914606+intron-Distal4.873818.24265K562XRN2
chr1899147059914826+intron-Distal4.4070314.08055K562XRN2
chr1899183989918464+intron-Distal3.8008711.78667K562PTBP1
chr1899408619940876+intron-Distal4.724587.58902K562KHSRP
chr1899366519936704+intron-Distal4.286374.72426K562LIN28B
chr1899462889946343+intron-Distal3.731066.65059HepG2U2AF1
chr1899263519926386+intron-Distal3.870743.20552HepG2KHSRP
chr1899144699914511+intron-Distal4.105906.89981K562EFTUD2
chr1899219609921987+intron-Distal4.0314613.13856K562KHSRP
chr1899186659918752+intron-Distal5.3863710.38449K562MATR3
chr1899308339930914+intron-Distal4.3996613.62318K562QKI
chr1899308489930924+intron-Distal5.072447.27974HepG2QKI
chr1899200609920181+intron-Distal4.2981814.80766K562TARDBP
chr1899214969921555+intron-Distal4.103974.45640K562KHDRBS1
chr1899416089941670+intron-Distal3.172608.75560K562KHSRP
chr1899200119920072+intron-Distal3.4037910.45480K562EXOSC5
chr1899321319932172+intron-Distal3.720305.95946K562KHSRP
chr1899146369914684+intron-Distal3.370683.36616K562NONO
chr1899149979915055+intron-Distal3.419967.47864K562NONO
chr1899320179932126+intron-Distal,intron-Proximal3.1991110.37303K562PRPF8
chr1899199639920012+intron-Distal4.285149.39320K562TARDBP
chr1899261409926197+intron-Distal4.7557322.53810K562KHSRP
chr1899251589925172+intron-Distal3.619865.62040K562TIA1
chr1899371359937180+intron-Distal,intron-Proximal3.742457.65809K562PRPF8
chr1899252219925274+intron-Distal5.5777240.06003K562KHSRP
chr1899219839922056+intron-Distal4.4962526.92376HepG2U2AF2
chr1899148359914912+intron-Distal4.7606612.29596HepG2EFTUD2
chr1899151059915147+intron-Distal,intron-Proximal4.555339.05950K562HNRNPM
chr1899396289939677+intron-Distal3.040375.12776HepG2U2AF2
chr1899234569923505+intron-Distal4.6890429.56039K562KHSRP
chr1899236699923728+intron-Distal3.966147.39881K562TIA1
chr1899151479915190+intron-Distal,intron-Proximal3.737216.55884K562HNRNPM
chr1899149989915099+intron-Distal,intron-Proximal3.151698.79683HepG2NKRF
chr1899251499925167+intron-Distal4.1552717.10028K562KHSRP
chr1899158829915932+intron-Distal,intron-Proximal3.2024111.20715K562EXOSC5
chr1899240939924110+intron-Distal3.381268.98645K562KHSRP
chr1899150559915110+intron-Distal,intron-Proximal3.613747.22702K562NONO
chr1899269679927004+intron-Distal3.8442611.34805K562KHSRP
chr1899173149917397+intron-Distal3.248285.01731HepG2HNRNPC
chr1899148369914913+intron-Distal3.591259.20036HepG2NKRF
chr1899243259924444+intron-Distal4.9080133.98674K562QKI
chr1899148439914942+intron-Distal4.2227910.62755K562XRN2
chr1899242349924311+intron-Distal3.254743.17814K562U2AF1
chr1899312949931403+intron-Distal3.545526.40520K562TARDBP
chr1899495279949555+intron-Distal3.747165.83959K562KHSRP
chr1899152379915305+intron-Distal3.849269.69977K562HNRNPM
chr1899251169925149+intron-Distal3.8326213.73292K562KHSRP
chr1899213419921398+intron-Distal3.742415.70297K562TIA1
chr1899251409925158+intron-Distal4.014579.75237K562TIA1
chr1899220039922051+intron-Distal4.4248619.14578K562U2AF2
chr1899462799946288+intron-Distal3.101373.88746HepG2U2AF1
chr1899146849914792+intron-Distal5.0305914.90892HepG2EFTUD2
chr1899146069914689+intron-Distal4.6751814.34685K562XRN2
chr1899161459916204+intron-Distal3.837097.86956K562EXOSC5
chr1899219689921983+intron-Distal3.622366.75956HepG2U2AF2
chr1899146809914780+intron-Distal5.3350612.42683HepG2XRN2
chr1899320329932071+intron-Distal,intron-Proximal4.392644.20763HepG2U2AF2
chr1899389509939030+intron-Distal3.6242710.50728K562KHSRP
chr1899148829914963+intron-Distal3.130125.45325K562HNRNPM
chr1899200729920206+intron-Distal5.0057728.58966K562EXOSC5
chr1899148139914882+intron-Distal3.052653.04371K562HNRNPM
chr1899239669924063+intron-Distal4.2206921.94002K562KHSRP
chr1899219709922046+intron-Distal4.343655.18202HepG2U2AF1
chr1899495559949589+intron-Distal3.021323.29251K562KHSRP
chr1899242159924309+intron-Distal4.4448119.62278HepG2U2AF2
chr1899240639924093+intron-Distal4.0303414.53524K562KHSRP
chr1899150109915040+intron-Distal4.3490012.95664K562HNRNPM
chr1899235059923552+intron-Distal5.6490730.97371K562KHSRP
chr1899366519936703+intron-Distal4.130086.75060K562RBM15
chr1899200129920060+intron-Distal5.123069.81960K562TARDBP
chr1899184169918461+intron-Distal3.326013.30286HepG2PTBP1
chr1899245169924569+intron-Distal4.3586519.00389K562KHSRP
chr1899165489916610+intron-Distal4.1021513.54595K562EXOSC5
chr1899408719940913+intron-Distal3.113453.04623HepG2KHSRP
chr1899251229925140+intron-Distal3.983469.53049K562TIA1
chr1899270049927023+intron-Distal3.5854614.30247K562KHSRP
chr1899239449923978+intron-Distal3.547027.14525K562GPKOW
chr1899184289918519+intron-Distal4.239007.66911K562MATR3
chr1899415379941566+intron-Distal3.407579.24170K562KHSRP
chr1899184619918537+intron-Distal3.699633.30286HepG2PTBP1
chr1899270239927071+intron-Distal3.5170616.96577K562KHSRP
chr1899242319924308+intron-Distal3.9545712.69572K562U2AF2
chr1899149989915100+intron-Distal,intron-Proximal3.421008.61484K562XRN2
chr1899506199950682+intron-Distal,intron-Proximal3.596404.88100K562AQR
chr1899409579941044+intron-Distal3.049005.83446HepG2HNRNPUL1
chr1899146179914694+intron-Distal4.3512011.58020HepG2NKRF
chr1899252049925221+intron-Distal5.3479831.32851K562KHSRP
chr1899241419924190+intron-Distal3.7837616.51520K562KHSRP
chr1899149639915008+intron-Distal3.959638.75714K562HNRNPM
chr1899461599946260+intron-Distal4.0455818.07879K562KHSRP
chr1899243259924467+intron-Distal4.854395.20135HepG2QKI
chr1899435129943609+intron-Distal3.230863.58206K562LIN28B
chr1899251909925251+intron-Distal3.195495.39573HepG2KHSRP
chr1899236629923707+intron-Distal4.627166.22569K562CPEB4
chr1899148349914934+intron-Distal3.422347.90441HepG2XRN2
chr1899367089936742+intron-Distal3.673813.61259K562ZNF622
chr1899415669941608+intron-Distal4.6730314.36151K562KHSRP
chr1899251679925204+intron-Distal4.9541829.49036K562KHSRP
chr1899462789946339+intron-Distal3.243208.46576K562U2AF1
chr1899320039932092+intron-Distal,intron-Proximal3.9759014.06167K562AQR
chr1899145809914617+intron-Distal3.042183.20348K562PRPF8
chr1899243869924441+intron-Distal4.7011625.25991K562KHSRP
chr1899219869922003+intron-Distal4.2624316.68801K562U2AF2
chr1899145409914605+intron-Distal4.126118.08764HepG2EFTUD2
chr1899148629914903+intron-Distal3.038145.25094K562PRPF8
chr1899148439914943+intron-Distal3.8611912.85356K562EFTUD2
chr1899160079916051+intron-Distal3.5684510.21408K562EXOSC5
chr1899143489914438+intron-Distal,intron-Proximal3.740627.03728K562XRN2
chr1899152289915276+intron-Distal3.4442510.96249K562EXOSC5
chr1899369219936974+intron-Proximal3.699467.26618K562SF3B4
chr1899143549914410+intron-Proximal3.866445.42305HepG2XRN2
chr1899503329950381+intron-Proximal3.7295712.69454K562SF3B4
chr1899143469914417+intron-Proximal4.8781711.64439HepG2EFTUD2
chr1899143499914423+intron-Proximal3.8220512.28885K562EFTUD2
chr1899362249936284+intron-Proximal3.4785012.38978K562GPKOW
chr1899143409914416+intron-Proximal3.254886.39306HepG2NKRF
chr1899505859950616+intron-Proximal4.582406.99120K562AQR
chr1899143609914399+intron-Proximal4.1228121.88326HepG2PRPF8
chr1899360509936102+intron-Proximal4.285689.62011K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VAPA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VAPA is not available on ENCORE database.

  • 100 RBPs can affect the levels of VAPA.  








The Knockdown/knockout RNA-Seq assay for VAPA is not available on ENCORE database.





100 RBPs can affect the gene expression of VAPA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VAPAENSG00000101558.93209.229302385.094600.428103.500502.44500HepG2ABCF1
VAPAENSG00000101558.92961.710102280.652600.376906.867705.71710HepG2AKAP8L
VAPAENSG00000101558.92895.251402152.468300.427604.844503.04190HepG2ATP5C1
VAPAENSG00000101558.92447.250501810.036500.435004.743903.98660HepG2BOP1
VAPAENSG00000101558.92077.058502640.75180-0.346402.705501.94130HepG2CIRBP
VAPAENSG00000101558.93290.402602813.790200.225602.630302.00140HepG2CELF1
VAPAENSG00000101558.92652.546403025.62500-0.189902.863702.11070HepG2DAZAP1
VAPAENSG00000101558.92422.820001843.025800.394503.051501.70190HepG2DDX27
VAPAENSG00000101558.91344.700902243.99570-0.7388010.598808.77060HepG2DDX5
VAPAENSG00000101558.91716.694402171.85470-0.339305.015104.15190HepG2DKC1
VAPAENSG00000101558.91674.784701931.17510-0.205502.651602.01130HepG2DNAJC2
VAPAENSG00000101558.91760.519901360.268200.372002.802901.89460HepG2EIF3D
VAPAENSG00000101558.91261.036602936.80710-1.2196020.9463019.22550HepG2EIF4A3
VAPAENSG00000101558.91665.038802066.16230-0.311402.425201.40180HepG2ESF1
VAPAENSG00000101558.91298.080602218.16990-0.7730014.3097012.49310HepG2EWSR1
VAPAENSG00000101558.93260.286402408.394000.436803.597102.72770HepG2FIP1L1
VAPAENSG00000101558.91086.589701664.51900-0.615302.301601.38240HepG2FTO
VAPAENSG00000101558.92369.167702962.94010-0.322602.397201.75140HepG2FXR1
VAPAENSG00000101558.91999.417302748.65360-0.459103.900403.11720HepG2G3BP1
VAPAENSG00000101558.92252.986402917.92770-0.373103.124302.17850HepG2G3BP2
VAPAENSG00000101558.91261.691301967.23370-0.640809.293208.21010HepG2HNRNPA1
VAPAENSG00000101558.93510.440502780.583200.336205.746804.48060HepG2HNRNPA2B1
VAPAENSG00000101558.91561.065302188.12190-0.487205.660404.69680HepG2HNRNPC
VAPAENSG00000101558.91996.189202783.04560-0.479405.280004.33760HepG2HNRNPK
VAPAENSG00000101558.92250.098102756.14610-0.292704.608503.75610HepG2HNRNPL
VAPAENSG00000101558.91397.439401797.76310-0.363402.750202.12240HepG2HNRNPLL
VAPAENSG00000101558.91244.221702173.66000-0.8049025.1713023.49130HepG2HNRNPU
VAPAENSG00000101558.92031.598302793.97910-0.459704.283303.45960HepG2IGF2BP2
VAPAENSG00000101558.91574.222702621.89670-0.736003.387802.29900HepG2IGF2BP3
VAPAENSG00000101558.91792.017202220.33230-0.309203.086402.31550HepG2ILF2
VAPAENSG00000101558.91945.344902680.06830-0.462202.829901.49080HepG2ILF3
VAPAENSG00000101558.91990.912902619.20410-0.395702.610301.46240HepG2KHDRBS1
VAPAENSG00000101558.93820.607402883.399300.405902.747501.92030HepG2LARP4
VAPAENSG00000101558.91030.013101593.98440-0.630006.917905.76870HepG2NSUN2
VAPAENSG00000101558.92054.410002706.79010-0.397904.989104.21110HepG2PCBP1
VAPAENSG00000101558.91516.801801938.74180-0.354103.987603.11910HepG2PPIL4
VAPAENSG00000101558.91414.858201845.66140-0.383505.645204.58120HepG2PRPF4
VAPAENSG00000101558.92604.045203040.14250-0.223403.790703.12020HepG2PUM1
VAPAENSG00000101558.92608.191903037.94410-0.220002.071101.48580HepG2PUM2
VAPAENSG00000101558.92056.453302312.24940-0.169101.854001.32870HepG2PUS1
VAPAENSG00000101558.92572.213902982.93880-0.213702.082901.52950HepG2QKI
VAPAENSG00000101558.92979.140002098.656900.505302.625201.93740HepG2RAVER1
VAPAENSG00000101558.92382.498203065.22520-0.363506.458405.69080HepG2NELFE
VAPAENSG00000101558.92185.895802854.83060-0.385207.224706.29830HepG2RECQL
VAPAENSG00000101558.93420.388602737.704700.321102.863902.17020HepG2RPLP0
VAPAENSG00000101558.91369.884501935.77680-0.498908.121407.10350HepG2SAFB2
VAPAENSG00000101558.92742.131102163.002200.342201.973601.40240HepG2SF3A3
VAPAENSG00000101558.91330.833801779.49100-0.419103.817602.99970HepG2SF3B1
VAPAENSG00000101558.92112.883202745.98000-0.378108.531007.40520HepG2SLBP
VAPAENSG00000101558.91740.808802257.50430-0.375004.320703.54830HepG2SMN1
VAPAENSG00000101558.92813.760002138.301300.395902.332701.46220HepG2SMNDC1
VAPAENSG00000101558.95066.025003894.395800.379405.485004.84540HepG2SRFBP1
VAPAENSG00000101558.94020.623102993.091600.4257010.237909.45640HepG2SRSF1
VAPAENSG00000101558.93129.369902435.035300.361807.150106.33770HepG2SRSF9
VAPAENSG00000101558.91140.899801608.73140-0.495802.659201.44330HepG2STAU1
VAPAENSG00000101558.92916.208701961.167300.572304.103302.62410HepG2SUB1
VAPAENSG00000101558.92192.769202690.29390-0.295003.741703.10590HepG2TAF15
VAPAENSG00000101558.91033.336901751.98360-0.7617010.844509.55130HepG2TARDBP
VAPAENSG00000101558.91515.564102130.98260-0.4917010.233609.25430HepG2TRIM56
VAPAENSG00000101558.92943.454702060.276900.514605.757804.86830HepG2U2AF1
VAPAENSG00000101558.92299.582801971.695100.221802.366501.38650HepG2UTP18
VAPAENSG00000101558.92555.145801851.997200.4642010.442009.39770HepG2UTP3
VAPAENSG00000101558.91355.559501930.17720-0.509804.364903.46010HepG2XRN2
VAPAENSG00000101558.92566.145801821.423900.4944013.0005011.72170HepG2ZC3H8
VAPAENSG00000101558.92756.275302109.710300.385609.401108.54520HepG2ZNF622
VAPAENSG00000101558.95757.266804301.841200.420305.483503.75540K562AARS
VAPAENSG00000101558.910155.740207222.322800.4917016.2296014.97470K562AGGF1
VAPAENSG00000101558.99969.445607936.179300.329003.514102.37290K562AKAP8
VAPAENSG00000101558.99287.983207515.139100.305503.138802.44180K562AKAP8L
VAPAENSG00000101558.97756.707309489.11580-0.290803.032702.42390K562AQR
VAPAENSG00000101558.910214.712907885.161300.373306.884305.35040K562ATP5C1
VAPAENSG00000101558.95166.322304252.549000.280702.187501.41840K562BOP1
VAPAENSG00000101558.912934.396408631.121300.583507.018805.12770K562CCDC124
VAPAENSG00000101558.93450.016304521.62130-0.390205.230304.15980K562CPSF6
VAPAENSG00000101558.93386.714805807.95480-0.778104.367002.01170K562DAZAP1
VAPAENSG00000101558.910585.802408086.923100.388408.081906.45000K562DKC1
VAPAENSG00000101558.94966.866206065.84160-0.288404.918903.28430K562EIF2S1
VAPAENSG00000101558.92345.765805769.53940-1.2984040.2486036.82420K562EIF4A3
VAPAENSG00000101558.97813.620005690.471500.457305.169902.92870K562FASTKD2
VAPAENSG00000101558.96432.195304702.291700.451806.259904.14710K562FUS
VAPAENSG00000101558.99336.033006248.217800.579305.152404.11940K562G3BP2
VAPAENSG00000101558.94671.254605451.27450-0.222802.604201.49760K562GLRX3
VAPAENSG00000101558.93636.485704316.98890-0.247502.110701.41370K562GPKOW
VAPAENSG00000101558.96696.074208495.88640-0.343404.302003.36300K562GRSF1
VAPAENSG00000101558.92317.107004706.92490-1.0225029.0566027.20910K562HNRNPC
VAPAENSG00000101558.99150.277207426.438300.301002.464401.30650K562HNRNPK
VAPAENSG00000101558.95572.931006820.21630-0.291404.128703.02970K562HNRNPU
VAPAENSG00000101558.911067.888207975.494000.472607.072805.60840K562KIF1C
VAPAENSG00000101558.95737.555907814.17340-0.445706.224604.94210K562MAGOH
VAPAENSG00000101558.910631.868107634.467200.477704.865503.31540K562MAK16
VAPAENSG00000101558.96113.378807798.54450-0.351204.390603.20370K562MATR3
VAPAENSG00000101558.911543.597508934.560400.369503.797902.70360K562MBNL1
VAPAENSG00000101558.93552.964604213.88260-0.246102.186301.40710K562METAP2
VAPAENSG00000101558.94134.279805731.30680-0.4712013.8543012.21300K562MTPAP
VAPAENSG00000101558.99372.868206262.475100.581703.807002.72800K562NAA15
VAPAENSG00000101558.95102.735406367.98220-0.3196011.039809.68640K562NSUN2
VAPAENSG00000101558.92812.454304795.63470-0.7699011.301709.62300K562PCBP3
VAPAENSG00000101558.92169.929803678.46900-0.7615017.5884015.66510K562POLR2G
VAPAENSG00000101558.95500.524104401.632300.321402.976202.19920K562PRPF8
VAPAENSG00000101558.93475.525504220.27000-0.280102.398701.56310K562PSIP1
VAPAENSG00000101558.95921.392107591.84890-0.358504.728003.88210K562PTBP1
VAPAENSG00000101558.911581.2154013202.30540-0.189002.191201.33540K562PUM2
VAPAENSG00000101558.910726.717507453.065000.525207.529506.67980K562PUS1
VAPAENSG00000101558.96244.786004884.313200.354403.912401.92980K562SND1
VAPAENSG00000101558.95446.691706437.68020-0.241205.103003.87810K562SRPK2
VAPAENSG00000101558.93062.943204059.75940-0.406505.290303.74870K562SRSF4
VAPAENSG00000101558.93825.947204535.99670-0.245603.234001.96330K562SRSF7
VAPAENSG00000101558.98940.3829011053.03230-0.306004.035002.23330K562SUCLG1
VAPAENSG00000101558.94685.696703689.526100.344704.642203.57170K562SYNCRIP
VAPAENSG00000101558.95449.096307532.52780-0.467105.431604.42360K562TARDBP
VAPAENSG00000101558.93098.566204059.18300-0.389603.409202.36550K562TIAL1
VAPAENSG00000101558.93090.245104312.45800-0.480806.164804.62330K562TRIM56
VAPAENSG00000101558.97226.355706240.191900.211603.311401.91380K562TROVE2
VAPAENSG00000101558.98610.946906255.602200.460908.226206.82650K562U2AF2
VAPAENSG00000101558.93346.690304510.67670-0.430604.303103.00670K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VAPA is not available on ENCORE database.





19 RBPs can affect the splicing of VAPA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEVAPAENSG00000101558.9chr18+9927092992725199146099915062993180699319590.323000.000180.00505includedK562SRSF1
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.114000.000000.00000includedHepG2PRPF8
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.168000.000000.00000includedHepG2DDX59
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.185000.000000.00000includedHepG2U2AF2
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.054000.000000.00928includedK562NONO
SEVAPAENSG00000101558.9chr18+9938243993833899369829937063994492099450550.066000.003090.03132includedK562AQR
SEVAPAENSG00000101558.9chr18+994492099450559936982993706399503919950565-0.051000.000000.00000excludedK562PUS1
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.061000.000170.05009includedHepG2EFTUD2
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.306000.000000.00000includedHepG2SFPQ
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.056000.000000.00002includedK562LARP4
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.067000.000010.00096includedHepG2MATR3
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.111000.000000.00000includedHepG2LARP4
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.075000.000000.00001includedHepG2SRSF1
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.071000.000020.00284includedHepG2TIAL1
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.055000.000110.04932includedHepG2BCCIP
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.071000.000000.00000includedK562U2AF2
SEVAPAENSG00000101558.9chr18+9927092992725199146099915062993180699319590.326000.000670.02720includedK562TARDBP
SEVAPAENSG00000101558.9chr18+9938243993833899369829937063994492099450550.080000.003610.09789includedK562TARDBP
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.058000.000040.00780includedK562CPSF6
SEVAPAENSG00000101558.9chr18+9944920994505599369829937063995039199505650.082000.000000.00008includedHepG2DDX55
MXEVAPAENSG00000101558.9chr18+993610699362109936982993706399318069931959995039199505650.139000.008000.074571includedK562DROSHA
MXEVAPAENSG00000101558.9chr18+993180699319599936106993621099140589914332993698299370630.134000.000000.000001includedK562DROSHA
MXEVAPAENSG00000101558.9chr18+993824399383389944877994505599369829937063995039199505650.124000.000520.005131includedK562AQR
MXEVAPAENSG00000101558.9chr18+993824399383389944920994505599369829937063995039199505650.072000.001700.014451includedK562AQR
MXEVAPAENSG00000101558.9chr18+993824399383389944847994505599369829937063995039199505650.124000.000520.005131includedK562AQR
MXEVAPAENSG00000101558.9chr18+99318069931959993610699362109914058991433299369829937063-0.058000.007970.078802includedK562U2AF2
MXEVAPAENSG00000101558.9chr18+993824399383389944920994505599369829937063995039199505650.088000.000990.020621includedK562HNRNPC
MXEVAPAENSG00000101558.9chr18+99318069931959993610699362109914058991433299369829937063-0.070000.001790.055602includedK562TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VAPA is not avaliable on ENCORE database.