TRPM7

General Information

Gene Name : TRPM7
Gene ID : ENSG00000092439.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TRPM7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TRPM7	ENSG00000092439.14	23.85	16.90	20.38	ENCSR000AEF
HepG2	TRPM7	ENSG00000092439.14	8.84	17.19	13.02	ENCSR985KAT
K562	TRPM7	ENSG00000092439.14	18.92	21.20	20.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TRPM7 is not avaliable on ENCORE database.

Proteins bound to RNA

TRPM7 RNA is bound by 36 proteins.

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eCLIP assay for TRPM7 is not avaliable on ENCORE database.

36 proteins are bound to TRPM7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	50929641	50929753	-	CDS,intron-Distal	6.96526	28.50139	HepG2	BCLAF1
chr15	50958596	50958688	-	intron-Distal	4.35064	23.78349	K562	PTBP1
chr15	50935710	50935751	-	CDS,intron-Distal,intron-Proximal	4.82626	17.79964	HepG2	BCLAF1
chr15	50958590	50958698	-	intron-Distal	4.25703	16.70748	HepG2	PTBP1
chr15	50904892	50904971	-	CDS,intron-Distal	5.23678	16.21052	HepG2	BCLAF1
chr15	50892743	50892796	-	intron-Distal	5.65350	15.62868	K562	KHSRP
chr15	50901849	50901916	-	CDS,intron-Distal,intron-Proximal	6.31618	15.35511	HepG2	BCLAF1
chr15	50903459	50903516	-	CDS,intron-Distal	5.32512	15.16835	HepG2	BCLAF1
chr15	50904810	50904880	-	CDS,intron-Distal	4.45035	15.11988	HepG2	BCLAF1
chr15	50978922	50978993	-	5'-UTR,intron-Distal,intron-Proximal	5.55268	13.97750	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 143 entries

eCLIP assay for TRPM7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TRPM7 is not available on ENCORE database.
77 RBPs can affect the levels of TRPM7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TRPM7 is not available on ENCORE database.

77 RBPs can affect the gene expression of TRPM7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRPM7	ENSG00000092439.9	941.35990	1589.19940	-0.75550	12.62420	10.50030	K562	RCC2
TRPM7	ENSG00000092439.9	2211.69290	1587.55050	0.47820	9.94250	9.08590	HepG2	SSB
TRPM7	ENSG00000092439.9	682.42540	1095.51010	-0.68290	9.86180	9.02070	HepG2	TIAL1
TRPM7	ENSG00000092439.9	662.84800	1004.00600	-0.59900	10.09890	8.98850	HepG2	SAFB2
TRPM7	ENSG00000092439.9	1904.83300	1156.38270	0.71990	10.13260	8.86010	HepG2	SF3B1
TRPM7	ENSG00000092439.9	753.07660	1105.27290	-0.55350	9.05930	8.12980	HepG2	TRIM56
TRPM7	ENSG00000092439.9	2383.71110	3314.52610	-0.47560	8.46330	7.45140	K562	RBM15
TRPM7	ENSG00000092439.9	704.75560	1001.68680	-0.50720	8.23010	7.17940	HepG2	DNAJC2
TRPM7	ENSG00000092439.9	788.32930	1127.40220	-0.51610	8.08930	7.09260	HepG2	HNRNPU
TRPM7	ENSG00000092439.9	1655.06650	1067.03030	0.63320	7.94310	6.88180	HepG2	U2AF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TRPM7 is not available on ENCORE database.

12 RBPs can affect the splicing of TRPM7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TRPM7	ENSG00000092439.9	chr15	-	50862300	50862352			50852489	50854005	50866470	50866676	-0.08800	0.00000	0.00003	excluded	K562	AQR
SE	TRPM7	ENSG00000092439.9	chr15	-	50878588	50878685			50875285	50875353	50881788	50881853	-0.27400	0.00000	0.00009	excluded	K562	RBM15
A3SS	TRPM7	ENSG00000092439.9	chr15	-	50884705	50884841			50884705	50884823	50885813	50885946	0.14900	0.00000	0.00000	longer	K562	AQR
A3SS	TRPM7	ENSG00000092439.9	chr15	-	50885813	50885982			50885813	50885946	50886625	50886810	0.23600	0.00000	0.00000	longer	K562	AQR
RI	TRPM7	ENSG00000092439.9	chr15	-	50867920	50868116			50867920	50867986	50868065	50868116	0.14000	0.00000	0.00063	included	K562	BUD13
MXE	TRPM7	ENSG00000092439.9	chr15	-	50884107	50884823	50885813	50885982	50881788	50881853	50886625	50886810	0.18200	0.00000	0.00000	1included	K562	AQR
SE	TRPM7	ENSG00000092439.9	chr15	-	50878588	50878685			50875285	50875356	50881788	50881853	-0.15600	0.00002	0.00185	excluded	K562	UTP18
A3SS	TRPM7	ENSG00000092439.9	chr15	-	50875285	50875356			50875285	50875353	50881788	50881853	-0.20200	0.00002	0.00366	shorter	K562	RBM15
SE	TRPM7	ENSG00000092439.9	chr15	-	50880387	50880447			50878588	50878685	50881788	50881853	0.11200	0.00006	0.05882	included	K562	TROVE2
A3SS	TRPM7	ENSG00000092439.9	chr15	-	50866833	50866959			50866833	50866916	50867048	50867332	0.05700	0.00011	0.00097	longer	K562	AQR

Showing 1 to 10 of 40 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TRPM7

General Information

Functions

Localization

Domains (AlphaFold: TRPM7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TRPM7 is not avaliable on ENCORE database.

36 proteins are bound to TRPM7 RNA:

eCLIP assay for TRPM7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TRPM7 is not available on ENCORE database.

77 RBPs can affect the gene expression of TRPM7 :

The Knockdown/knockout RNA-Seq assay for TRPM7 is not available on ENCORE database.

12 RBPs can affect the splicing of TRPM7 :

The Knockdown/knockout RNA-Seq assay for TRPM7 is not avaliable on ENCORE database.