TMEM135

General Information

Gene Name : TMEM135
Gene ID : ENSG00000166575.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM135)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM135	ENSG00000166575.16	8.06	7.31	7.69	ENCSR000AEF
HepG2	TMEM135	ENSG00000166575.16	17.36	35.63	26.50	ENCSR985KAT
K562	TMEM135	ENSG00000166575.16	16.74	15.53	16.13	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM135 is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM135 RNA is bound by 35 proteins.

CanvasJS.com

eCLIP assay for TMEM135 is not avaliable on ENCORE database.

35 proteins are bound to TMEM135 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	86900220	86900267	+	intron-Distal	6.15297	35.48464	HepG2	PTBP1
chr11	86900166	86900220	+	intron-Distal	5.18803	29.73786	HepG2	PTBP1
chr11	86909624	86909764	+	intron-Distal	4.99187	23.78908	HepG2	PTBP1
chr11	86909537	86909697	+	intron-Distal	4.50236	22.25896	HepG2	PCBP2
chr11	86853798	86853907	+	intron-Distal	6.11757	18.99872	HepG2	PTBP1
chr11	86979254	86979289	+	intron-Distal	4.97149	18.74113	K562	PTBP1
chr11	86906415	86906484	+	intron-Distal	4.70642	18.00564	HepG2	PTBP1
chr11	86882965	86883049	+	intron-Distal	5.17708	16.84582	HepG2	XPO5
chr11	86930480	86930630	+	intron-Distal	4.96260	15.77814	HepG2	RBFOX2
chr11	86909648	86909756	+	intron-Distal	5.34733	15.55512	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 230 entries

eCLIP assay for TMEM135 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM135 is not available on ENCORE database.
145 RBPs can affect the levels of TMEM135.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM135 is not available on ENCORE database.

145 RBPs can affect the gene expression of TMEM135 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM135	ENSG00000166575.12	1000.40560	2732.29300	-1.44950	89.31550	86.78590	HepG2	SUCLG1
TMEM135	ENSG00000166575.12	288.47940	1541.31650	-2.41760	78.47290	75.40610	HepG2	HNRNPC
TMEM135	ENSG00000166575.12	359.08490	1487.87910	-2.05090	75.78240	73.84390	HepG2	TIAL1
TMEM135	ENSG00000166575.12	907.97120	2582.95000	-1.50830	66.57530	64.48740	HepG2	PUM1
TMEM135	ENSG00000166575.12	1504.72710	3421.09700	-1.18500	56.47270	54.77290	HepG2	NELFE
TMEM135	ENSG00000166575.12	591.66080	1693.52990	-1.51720	56.92420	54.40490	K562	FXR1
TMEM135	ENSG00000166575.12	796.80800	2352.10380	-1.56160	49.71940	48.05540	HepG2	RBM22
TMEM135	ENSG00000166575.12	207.42650	877.45070	-2.08070	49.14350	46.78390	K562	HNRNPC
TMEM135	ENSG00000166575.12	1437.28800	3021.03720	-1.07170	46.73510	44.81070	HepG2	PCBP1
TMEM135	ENSG00000166575.12	1456.65050	3074.05270	-1.07750	45.05550	43.41830	HepG2	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 183 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM135 is not available on ENCORE database.

9 RBPs can affect the splicing of TMEM135 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM135	ENSG00000166575.12	chr11	+	86786678	86786828			86782564	86782657	86802403	86802437	0.08800	0.00001	0.00106	included	HepG2	RBM22
SE	TMEM135	ENSG00000166575.12	chr11	+	86782564	86782657			86778735	86778863	86802403	86802437	-0.22400	0.00004	0.00139	excluded	K562	SF3B4
A3SS	TMEM135	ENSG00000166575.12	chr11	+	87016951	87017047			87016977	87017047	87013337	87013484	0.08300	0.00016	0.00134	longer	K562	AQR
MXE	TMEM135	ENSG00000166575.12	chr11	+	87013337	87013484	87016977	87017047	87006823	87006865	87020546	87020714	0.11600	0.00029	0.00289	1included	HepG2	U2AF2
MXE	TMEM135	ENSG00000166575.12	chr11	+	87013337	87013484	87016977	87017047	87006823	87006865	87020546	87020714	0.09200	0.00036	0.01524	1included	K562	PPIL4
SE	TMEM135	ENSG00000166575.12	chr11	+	86868382	86868448			86802403	86802437	86947679	86947726	-0.24500	0.00125	0.03645	excluded	HepG2	SF3A3
SE	TMEM135	ENSG00000166575.12	chr11	+	86778735	86778863			86749081	86749228	86802403	86802437	-0.07900	0.00233	0.05891	excluded	HepG2	SF3A3
MXE	TMEM135	ENSG00000166575.12	chr11	+	86802403	86802437	86868382	86868448	86782564	86782657	86947679	86947726	0.13600	0.00295	0.08136	1included	HepG2	SUPV3L1
MXE	TMEM135	ENSG00000166575.12	chr11	+	87016977	87017047	87020523	87020714	87013337	87013484	87029178	87029277	-0.05700	0.00313	0.02430	2included	K562	AQR
MXE	TMEM135	ENSG00000166575.12	chr11	+	86778735	86778863	86782564	86782657	86748885	86749228	86802403	86802437	-0.12900	0.00319	0.09087	2included	K562	AKAP8L

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM135

General Information

Functions

Localization

Domains (AlphaFold: TMEM135)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM135 is not avaliable on ENCORE database.

35 proteins are bound to TMEM135 RNA:

eCLIP assay for TMEM135 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM135 is not available on ENCORE database.

145 RBPs can affect the gene expression of TMEM135 :

The Knockdown/knockout RNA-Seq assay for TMEM135 is not available on ENCORE database.

9 RBPs can affect the splicing of TMEM135 :

The Knockdown/knockout RNA-Seq assay for TMEM135 is not avaliable on ENCORE database.