TCEA1

General Information

Gene Name : TCEA1
Gene ID : ENSG00000187735.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TCEA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TCEA1	ENSG00000187735.13	95.02	84.80	89.91	ENCSR000AEF
HepG2	TCEA1	ENSG00000187735.13	67.85	96.11	81.98	ENCSR985KAT
K562	TCEA1	ENSG00000187735.13	83.71	84.03	83.87	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TCEA1 is not avaliable on ENCORE database.

Proteins bound to RNA

TCEA1 RNA is bound by 21 proteins.

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eCLIP assay for TCEA1 is not avaliable on ENCORE database.

21 proteins are bound to TCEA1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	54880038	54880092	-	3'-UTR,intron-Distal	3.97638	25.97290	K562	PUM2
chr8	54891584	54891613	-	CDS,intron-Distal,intron-Proximal	4.26080	17.41829	K562	PUM2
chr8	54883004	54883024	-	CDS,intron-Distal,intron-Proximal	3.52776	15.22185	K562	PUM2
chr8	54885800	54885907	-	intron-Distal	5.59731	12.98299	K562	MATR3
chr8	54885650	54885754	-	intron-Distal	4.69776	12.70038	K562	MATR3
chr8	54906225	54906231	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.27610	12.67420	K562	UCHL5
chr8	54906231	54906261	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12056	12.20961	K562	UCHL5
chr8	54879242	54879333	-	3'-UTR,intron-Distal	3.31230	9.67424	K562	IGF2BP1
chr8	54906215	54906262	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.41669	9.07767	K562	TRA2A
chr8	54906268	54906307	-	3'-UTR,CDS,intron-Distal	3.36143	8.10579	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 66 entries

eCLIP assay for TCEA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TCEA1 is not available on ENCORE database.
115 RBPs can affect the levels of TCEA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TCEA1 is not available on ENCORE database.

115 RBPs can affect the gene expression of TCEA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TCEA1	ENSG00000187735.8	783.13710	2638.01080	-1.75210	75.55590	73.62370	HepG2	TIAL1
TCEA1	ENSG00000187735.8	15150.42780	6228.99130	1.28220	39.86810	37.35670	K562	HSPD1
TCEA1	ENSG00000187735.8	856.07760	3532.32350	-2.04480	38.57460	36.24120	HepG2	EIF4A3
TCEA1	ENSG00000187735.8	2571.49410	4585.43060	-0.83450	37.42140	35.06510	K562	MTPAP
TCEA1	ENSG00000187735.8	1416.58600	2661.32520	-0.90970	34.09800	32.39480	HepG2	TRIM56
TCEA1	ENSG00000187735.8	2606.18250	4408.85520	-0.75850	32.55670	31.33250	HepG2	SRFBP1
TCEA1	ENSG00000187735.8	1812.83260	3526.87370	-0.96010	30.55280	28.82390	HepG2	QKI
TCEA1	ENSG00000187735.8	7565.98190	4670.24070	0.69590	28.26530	26.67930	HepG2	ETF1
TCEA1	ENSG00000187735.8	8023.87790	4729.00540	0.76270	27.87570	26.00580	K562	EIF2S2
TCEA1	ENSG00000187735.8	2056.16540	3848.02890	-0.90420	27.84160	25.62220	HepG2	NOL12
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 150 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TCEA1 is not available on ENCORE database.

5 RBPs can affect the splicing of TCEA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TCEA1	ENSG00000187735.8	chr8	-	54922989	54923052			54912504	54912610	54934622	54934708	-0.07900	0.00000	0.00009	excluded	K562	SF3B4
SE	TCEA1	ENSG00000187735.8	chr8	-	54900673	54900735			54899528	54899585	54906227	54906315	-0.13700	0.00000	0.00001	excluded	K562	PUS1
SE	TCEA1	ENSG00000187735.8	chr8	-	54922989	54923052			54912504	54912610	54934622	54935089	-0.05400	0.00000	0.00000	excluded	K562	PUS1
SE	TCEA1	ENSG00000187735.8	chr8	-	54915451	54915500			54912504	54912610	54922989	54923052	0.06000	0.00000	0.00001	included	HepG2	MATR3
SE	TCEA1	ENSG00000187735.8	chr8	-	54922989	54923052			54912504	54912610	54934622	54935089	-0.06800	0.00001	0.00051	excluded	K562	U2AF2
MXE	TCEA1	ENSG00000187735.8	chr8	-	54882951	54883023	54891584	54891731	54879115	54880672	54896922	54897077	-0.13000	0.00256	0.03522	2included	K562	DROSHA

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TCEA1

General Information

Functions

Localization

Domains (AlphaFold: TCEA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TCEA1 is not avaliable on ENCORE database.

21 proteins are bound to TCEA1 RNA:

eCLIP assay for TCEA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TCEA1 is not available on ENCORE database.

115 RBPs can affect the gene expression of TCEA1 :

The Knockdown/knockout RNA-Seq assay for TCEA1 is not available on ENCORE database.

5 RBPs can affect the splicing of TCEA1 :

The Knockdown/knockout RNA-Seq assay for TCEA1 is not avaliable on ENCORE database.