STT3A

General Information

Gene Name : STT3A
Gene ID : ENSG00000134910.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: STT3A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	STT3A	ENSG00000134910.13	95.06	84.12	89.59	ENCSR000AEF
HepG2	STT3A	ENSG00000134910.13	222.88	248.94	235.91	ENCSR985KAT
K562	STT3A	ENSG00000134910.13	123.06	142.86	132.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for STT3A is not avaliable on ENCORE database.

Proteins bound to RNA

STT3A RNA is bound by 33 proteins.

CanvasJS.com

eCLIP assay for STT3A is not avaliable on ENCORE database.

33 proteins are bound to STT3A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	125482967	125483043	+	CDS	6.48624	90.46253	K562	SND1
chr11	125483980	125484027	+	CDS,intron-Proximal	5.88366	54.48737	HepG2	SND1
chr11	125479473	125479523	+	CDS,intron-Proximal	5.39885	51.87377	HepG2	PRPF8
chr11	125483043	125483072	+	CDS	5.62396	50.98586	K562	SND1
chr11	125482512	125482618	+	CDS	4.98523	50.76452	K562	SND1
chr11	125482906	125482967	+	CDS	4.36455	50.55881	K562	SND1
chr11	125482982	125483029	+	CDS	6.22114	46.57792	HepG2	SND1
chr11	125483983	125484028	+	CDS	4.81150	45.76115	K562	SND1
chr11	125478126	125478184	+	CDS,intron-Proximal	4.34934	41.39039	K562	SND1
chr11	125462742	125462793	+	5'-UTR,intron-Distal	5.01244	41.30637	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 173 entries

eCLIP assay for STT3A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for STT3A is not available on ENCORE database.
109 RBPs can affect the levels of STT3A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for STT3A is not available on ENCORE database.

109 RBPs can affect the gene expression of STT3A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
STT3A	ENSG00000134910.8	2370.48570	6106.87200	-1.36530	61.11830	59.34900	HepG2	TIAL1
STT3A	ENSG00000134910.8	3829.66510	6419.94380	-0.74530	43.95220	41.55170	HepG2	ILF2
STT3A	ENSG00000134910.8	3533.56500	5954.49910	-0.75290	35.89270	34.15050	HepG2	PUS1
STT3A	ENSG00000134910.8	3881.83880	6394.21290	-0.72000	27.52970	26.15160	HepG2	PTBP1
STT3A	ENSG00000134910.8	4400.12720	7115.97950	-0.69350	27.06740	25.73110	HepG2	NELFE
STT3A	ENSG00000134910.8	3906.96810	6285.03330	-0.68590	27.03080	25.29840	HepG2	HNRNPU
STT3A	ENSG00000134910.8	5507.09340	8315.41110	-0.59450	25.10030	23.98530	HepG2	SRFBP1
STT3A	ENSG00000134910.8	8511.65330	5597.06670	0.60470	22.88820	21.28160	HepG2	SAFB2
STT3A	ENSG00000134910.8	4019.31560	5844.58590	-0.54020	22.02820	20.54940	HepG2	CKAP4
STT3A	ENSG00000134910.8	3902.27010	5584.40910	-0.51710	20.25490	18.64430	HepG2	DNAJC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for STT3A is not available on ENCORE database.

5 RBPs can affect the splicing of STT3A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	STT3A	ENSG00000134910.8	chr11	+	125463532	125463620			125462730	125462813	125465775	125465898	-0.05100	0.00000	0.00227	excluded	HepG2	PPIG
SE	STT3A	ENSG00000134910.8	chr11	+	125463532	125463620			125462730	125462813	125465775	125465898	0.13200	0.00000	0.00065	included	K562	SAFB
A3SS	STT3A	ENSG00000134910.8	chr11	+	125472180	125472319			125472197	125472319	125466953	125467014	0.05500	0.00000	0.00001	longer	K562	AQR
A3SS	STT3A	ENSG00000134910.8	chr11	+	125489857	125490021			125489905	125490021	125488267	125488456	0.05300	0.00000	0.00000	longer	K562	AQR
SE	STT3A	ENSG00000134910.8	chr11	+	125465775	125465898			125462713	125462813	125466953	125467014	-0.05800	0.00002	0.00164	excluded	K562	HNRNPU
MXE	STT3A	ENSG00000134910.8	chr11	+	125479328	125479484	125481322	125481414	125478003	125478184	125482486	125482642	0.20900	0.00114	0.00903	1included	HepG2	U2AF2

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

STT3A

General Information

Functions

Localization

Domains (AlphaFold: STT3A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for STT3A is not avaliable on ENCORE database.

33 proteins are bound to STT3A RNA:

eCLIP assay for STT3A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for STT3A is not available on ENCORE database.

109 RBPs can affect the gene expression of STT3A :

The Knockdown/knockout RNA-Seq assay for STT3A is not available on ENCORE database.

5 RBPs can affect the splicing of STT3A :

The Knockdown/knockout RNA-Seq assay for STT3A is not avaliable on ENCORE database.