STRBP

General Information

Gene Name : STRBP
Gene ID : ENSG00000165209.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: STRBP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	STRBP	ENSG00000165209.18	56.46	54.75	55.61	ENCSR000AEF
HepG2	STRBP	ENSG00000165209.18	16.76	25.52	21.14	ENCSR985KAT
K562	STRBP	ENSG00000165209.18	40.50	47.23	43.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for STRBP is not avaliable on ENCORE database.

Proteins bound to RNA

STRBP RNA is bound by 46 proteins.

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eCLIP assay for STRBP is not avaliable on ENCORE database.

46 proteins are bound to STRBP RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	126030177	126030274	-	intron-Distal	6.81418	31.07655	HepG2	FAM120A
chr9	125931843	125931895	-	intron-Distal	5.06029	28.58851	K562	KHSRP
chr9	126030219	126030308	-	intron-Distal	5.06004	26.92118	K562	CSTF2T
chr9	125931895	125931917	-	intron-Distal	5.76883	24.15168	K562	KHSRP
chr9	126030223	126030305	-	intron-Distal	5.30420	23.32104	K562	GTF2F1
chr9	126014056	126014196	-	intron-Distal	4.22864	20.12358	K562	KHSRP
chr9	126018942	126019043	-	intron-Distal	4.41823	18.86777	K562	TARDBP
chr9	125931917	125931956	-	intron-Distal	4.81505	18.79790	K562	KHSRP
chr9	125973439	125973517	-	intron-Distal	4.29047	18.60983	K562	KHSRP
chr9	125941256	125941292	-	CDS,intron-Distal,intron-Proximal	6.61812	16.99599	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 248 entries

eCLIP assay for STRBP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for STRBP is not available on ENCORE database.
100 RBPs can affect the levels of STRBP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for STRBP is not available on ENCORE database.

100 RBPs can affect the gene expression of STRBP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
STRBP	ENSG00000165209.14	1681.22100	3605.62700	-1.10070	25.88600	24.28930	K562	AQR
STRBP	ENSG00000165209.14	402.71560	843.88690	-1.06730	18.78050	17.69090	HepG2	TIAL1
STRBP	ENSG00000165209.14	429.70570	957.12080	-1.15540	15.46380	14.10500	HepG2	DDX3X
STRBP	ENSG00000165209.14	433.30080	907.40960	-1.06640	12.76980	11.46620	HepG2	NCBP2
STRBP	ENSG00000165209.14	517.63660	991.47600	-0.93760	11.94660	10.63100	HepG2	CPSF6
STRBP	ENSG00000165209.14	1587.60700	2617.29680	-0.72120	11.48110	9.60120	K562	RBM22
STRBP	ENSG00000165209.14	540.90860	851.32410	-0.65430	10.22940	9.25030	HepG2	TRIM56
STRBP	ENSG00000165209.14	2283.67860	3515.20970	-0.62230	10.67900	9.16450	K562	GRSF1
STRBP	ENSG00000165209.14	422.54970	822.16520	-0.96030	9.60740	8.53030	HepG2	DDX6
STRBP	ENSG00000165209.14	1258.58920	2005.30720	-0.67200	9.84550	8.28710	K562	EIF4A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for STRBP is not available on ENCORE database.

13 RBPs can affect the splicing of STRBP :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	-0.12200	0.00000	0.00011	excluded	K562	HNRNPL
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	-0.12400	0.00001	0.00046	excluded	K562	U2AF2
SE	STRBP	ENSG00000165209.14	chr9	-	125999108	125999245	125946410	125946577	126030714	126030843	-0.30900	0.00002	0.00167	excluded	K562	HNRNPU
SE	STRBP	ENSG00000165209.14	chr9	-	125920290	125920402	125910056	125910149	125920610	125920708	-0.08500	0.00006	0.00217	excluded	K562	U2AF1
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	-0.06800	0.00013	0.00720	excluded	K562	UTP18
SE	STRBP	ENSG00000165209.14	chr9	-	125920290	125920402	125910056	125910149	125920610	125920708	-0.07300	0.00014	0.00381	excluded	K562	U2AF2
A3SS	STRBP	ENSG00000165209.14	chr9	-	125898714	125898812	125898714	125898794	125909133	125909333	0.31300	0.00017	0.00140	longer	K562	AQR
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	0.05800	0.00035	0.07057	included	K562	GPKOW
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	0.05500	0.00037	0.07364	included	K562	METAP2
SE	STRBP	ENSG00000165209.14	chr9	-	125901807	125901966	125898659	125898794	125909133	125909333	0.05900	0.00039	0.07499	included	K562	FTO

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

STRBP

General Information

Functions

Localization

Domains (AlphaFold: STRBP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for STRBP is not avaliable on ENCORE database.

46 proteins are bound to STRBP RNA:

eCLIP assay for STRBP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for STRBP is not available on ENCORE database.

100 RBPs can affect the gene expression of STRBP :

The Knockdown/knockout RNA-Seq assay for STRBP is not available on ENCORE database.

13 RBPs can affect the splicing of STRBP :

The Knockdown/knockout RNA-Seq assay for STRBP is not avaliable on ENCORE database.