SEPT6

General Information

Gene Name : SEPT6
Gene ID : ENSG00000125354.22
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SEPT6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SEPT6	ENSG00000125354.22	204.52	240.28	222.40	ENCSR000AEF
HepG2	SEPT6	ENSG00000125354.22	21.84	21.17	21.51	ENCSR985KAT
K562	SEPT6	ENSG00000125354.22	37.45	45.06	41.26	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SEPT6 is not avaliable on ENCORE database.

Proteins bound to RNA

SEPT6 RNA is bound by 26 proteins.

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eCLIP assay for SEPT6 is not avaliable on ENCORE database.

26 proteins are bound to SEPT6 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	118780733	118780754	-	intron-Distal	7.42214	38.52734	K562	DGCR8
chrX	118780724	118780733	-	intron-Distal	7.30855	35.39987	K562	DGCR8
chrX	118750986	118751073	-	3'-UTR,intron-Distal	4.13197	32.43582	K562	AGGF1
chrX	118771439	118771566	-	intron-Distal	6.88692	25.93204	K562	EIF4G2
chrX	118763281	118763413	-	3'-UTR,CDS,intron-Distal	3.04295	25.39590	K562	ZNF800
chrX	118763295	118763472	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.13724	25.13398	K562	ZNF622
chrX	118750985	118751078	-	3'-UTR,intron-Distal	4.06608	21.65496	K562	HNRNPL
chrX	118763257	118763400	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.00444	20.06905	K562	PUM1
chrX	118763288	118763472	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48930	18.95707	K562	UCHL5
chrX	118755347	118755390	-	intron-Distal	6.14990	16.68946	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 61 entries

eCLIP assay for SEPT6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SEPT6 is not available on ENCORE database.
102 RBPs can affect the levels of SEPT6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SEPT6 is not available on ENCORE database.

102 RBPs can affect the gene expression of SEPT6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SEPT6	ENSG00000125354.18	330.94810	1649.47220	-2.31730	75.13920	72.98440	HepG2	BOP1
SEPT6	ENSG00000125354.18	1006.11560	2058.84590	-1.03300	32.47090	30.52830	K562	FXR1
SEPT6	ENSG00000125354.18	1108.40520	2320.78640	-1.06610	27.63420	25.63110	K562	PTBP1
SEPT6	ENSG00000125354.18	666.45750	1621.46890	-1.28270	26.83130	24.90750	HepG2	SF3B1
SEPT6	ENSG00000125354.18	350.17660	1168.05040	-1.73790	18.93470	17.25070	HepG2	RAVER1
SEPT6	ENSG00000125354.18	1247.71320	2275.13410	-0.86670	18.51280	16.70360	K562	SRSF1
SEPT6	ENSG00000125354.18	773.43740	1329.14610	-0.78110	17.14730	15.84630	HepG2	UTP3
SEPT6	ENSG00000125354.18	759.12510	1327.28390	-0.80610	16.58770	15.32480	HepG2	SF3B4
SEPT6	ENSG00000125354.18	1039.08540	1615.79500	-0.63690	16.25230	15.05940	HepG2	PUM1
SEPT6	ENSG00000125354.18	742.97150	1484.57090	-0.99870	15.85170	14.03460	K562	PRPF8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 111 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SEPT6 is not available on ENCORE database.

15 RBPs can affect the splicing of SEPT6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.48400	0.00000	0.00015	included	K562	RBFOX2
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.42100	0.00000	0.00071	included	HepG2	HNRNPM
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.67700	0.00000	0.00000	included	HepG2	QKI
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.45200	0.00000	0.00044	included	HepG2	NCBP2
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	-0.15700	0.00000	0.00259	excluded	K562	LARP4
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	-0.25800	0.00000	0.00191	excluded	K562	UPF1
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.44600	0.00003	0.00703	included	HepG2	RBFOX2
MXE	SEPT6	ENSG00000125354.18	chrX	-	118797444	118797640	118809516	118809631	118786816	118787003	118827038	118827333	0.16900	0.00006	0.00537	1included	K562	IGF2BP2
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	0.50500	0.00008	0.01780	included	K562	HNRNPM
SE	SEPT6	ENSG00000125354.18	chrX	-	118759297	118759342			118752675	118752749	118763280	118763471	-0.15500	0.00011	0.00473	excluded	K562	AGGF1

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SEPT6

General Information

Functions

Localization

Domains (AlphaFold: SEPT6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SEPT6 is not avaliable on ENCORE database.

26 proteins are bound to SEPT6 RNA:

eCLIP assay for SEPT6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SEPT6 is not available on ENCORE database.

102 RBPs can affect the gene expression of SEPT6 :

The Knockdown/knockout RNA-Seq assay for SEPT6 is not available on ENCORE database.

15 RBPs can affect the splicing of SEPT6 :

The Knockdown/knockout RNA-Seq assay for SEPT6 is not avaliable on ENCORE database.