PIK3CD

General Information

Gene Name : PIK3CD
Gene ID : ENSG00000171608.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIK3CD)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIK3CD	ENSG00000171608.15	13.91	26.89	20.40	ENCSR000AEF
HepG2	PIK3CD	ENSG00000171608.15	7.47	4.57	6.02	ENCSR985KAT
K562	PIK3CD	ENSG00000171608.15	9.01	6.42	7.71	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIK3CD is not avaliable on ENCORE database.

Proteins bound to RNA

PIK3CD RNA is bound by 11 proteins.

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eCLIP assay for PIK3CD is not avaliable on ENCORE database.

11 proteins are bound to PIK3CD RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	9782681	9782751	+	intron-Proximal	6.60459	17.53326	K562	AQR
chr1	9776677	9776719	+	intron-Proximal	5.44234	15.34985	K562	AQR
chr1	9781691	9781827	+	3'-UTR,CDS,intron-Proximal	4.79073	13.57543	HepG2	SF3B4
chr1	9781773	9781838	+	3'-UTR,CDS,intron-Proximal	6.07816	13.04469	K562	SF3B4
chr1	9783350	9783436	+	intron-Proximal	5.86059	9.95272	K562	AQR
chr1	9782662	9782681	+	CDS,intron-Proximal	4.39655	9.29543	K562	AQR
chr1	9778973	9779017	+	intron-Proximal	4.58504	8.69247	K562	AQR
chr1	9780034	9780077	+	CDS,intron-Proximal	4.90923	7.25958	HepG2	PPIG
chr1	9783983	9784062	+	CDS,intron-Proximal	3.59162	7.16774	K562	AQR
chr1	9787883	9787934	+	3'-UTR	4.70130	6.41561	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 27 entries

eCLIP assay for PIK3CD is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PIK3CD is not available on ENCORE database.
87 RBPs can affect the levels of PIK3CD.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.

87 RBPs can affect the gene expression of PIK3CD :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIK3CD	ENSG00000171608.11	176.60520	417.36020	-1.24080	15.07690	13.17870	K562	U2AF2
PIK3CD	ENSG00000171608.11	547.32840	937.39210	-0.77620	12.61990	11.42390	K562	FXR1
PIK3CD	ENSG00000171608.11	467.84710	1000.77870	-1.09700	11.61970	10.65850	HepG2	NELFE
PIK3CD	ENSG00000171608.11	1093.70480	723.90860	0.59520	11.57170	10.64310	HepG2	ZNF622
PIK3CD	ENSG00000171608.11	810.61050	422.37140	0.94040	11.52120	10.17450	HepG2	SF3B1
PIK3CD	ENSG00000171608.11	362.26060	635.47880	-0.81080	11.18650	10.11190	HepG2	UTP3
PIK3CD	ENSG00000171608.11	627.78060	942.71580	-0.58660	8.71100	7.90100	HepG2	SSB
PIK3CD	ENSG00000171608.11	705.93240	418.39880	0.75460	8.55330	7.30490	HepG2	PPIL4
PIK3CD	ENSG00000171608.11	1384.75210	961.29980	0.52650	8.03650	7.26120	HepG2	RBM22
PIK3CD	ENSG00000171608.11	195.26990	417.05400	-1.09480	8.51200	7.12790	K562	G3BP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 98 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.

5 RBPs can affect the splicing of PIK3CD :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	PIK3CD	ENSG00000171608.11	chr1	+	9781501	9781918	9781501	9781645	9781818	9781918	0.39600	0.00026	0.00223	included	K562	PUS1
SE	PIK3CD	ENSG00000171608.11	chr1	+	9770162	9770338	9751524	9751629	9770481	9770654	0.30700	0.00140	0.03612	included	K562	AGGF1
RI	PIK3CD	ENSG00000171608.11	chr1	+	9781501	9781918	9781501	9781645	9781818	9781918	0.20100	0.00318	0.04755	included	HepG2	G3BP1
RI	PIK3CD	ENSG00000171608.11	chr1	+	9781501	9781918	9781501	9781645	9781818	9781918	0.18200	0.00543	0.04796	included	HepG2	RBM22
RI	PIK3CD	ENSG00000171608.11	chr1	+	9781501	9781918	9781501	9781645	9781818	9781918	0.14900	0.01605	0.08114	included	K562	AQR

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIK3CD

General Information

Functions

Localization

Domains (AlphaFold: PIK3CD)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIK3CD is not avaliable on ENCORE database.

11 proteins are bound to PIK3CD RNA:

eCLIP assay for PIK3CD is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.

87 RBPs can affect the gene expression of PIK3CD :

The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.

5 RBPs can affect the splicing of PIK3CD :

The Knockdown/knockout RNA-Seq assay for PIK3CD is not avaliable on ENCORE database.