PHKB

General Information

Gene Name : PHKB
Gene ID : ENSG00000102893.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PHKB)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PHKB	ENSG00000102893.15	26.40	23.72	25.06	ENCSR000AEF
HepG2	PHKB	ENSG00000102893.15	40.61	58.08	49.34	ENCSR985KAT
K562	PHKB	ENSG00000102893.15	38.93	40.31	39.62	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PHKB is not avaliable on ENCORE database.

Proteins bound to RNA

PHKB RNA is bound by 39 proteins.

CanvasJS.com

eCLIP assay for PHKB is not avaliable on ENCORE database.

39 proteins are bound to PHKB RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	47625029	47625097	+	intron-Distal	5.36873	34.19376	K562	PTBP1
chr16	47533664	47533755	+	CDS,intron-Distal,intron-Proximal	3.61021	25.36535	HepG2	BCLAF1
chr16	47497730	47497831	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	5.78688	24.95991	K562	QKI
chr16	47625435	47625555	+	intron-Distal	6.65121	24.32512	K562	MATR3
chr16	47630308	47630401	+	CDS	5.22304	23.61363	HepG2	BCLAF1
chr16	47531318	47531389	+	CDS,intron-Distal	3.69805	19.57725	HepG2	BCLAF1
chr16	47705071	47705174	+	intron-Distal	5.22591	19.08207	K562	KHSRP
chr16	47536899	47536960	+	CDS,intron-Distal,intron-Proximal	4.92835	18.25084	HepG2	BCLAF1
chr16	47592328	47592403	+	intron-Distal	5.91972	17.78304	HepG2	CSTF2
chr16	47625446	47625544	+	intron-Distal	4.51125	17.72310	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 275 entries

eCLIP assay for PHKB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PHKB is not available on ENCORE database.
87 RBPs can affect the levels of PHKB.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PHKB is not available on ENCORE database.

87 RBPs can affect the gene expression of PHKB :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PHKB	ENSG00000102893.11	6359.48990	3389.23250	0.90790	31.59590	29.84610	HepG2	QKI
PHKB	ENSG00000102893.11	953.78100	2050.34130	-1.10410	26.13660	24.38490	K562	HNRNPC
PHKB	ENSG00000102893.11	982.90780	2170.86580	-1.14310	22.70080	20.37590	HepG2	ADAR
PHKB	ENSG00000102893.11	1503.91970	2791.57990	-0.89240	21.02140	19.26530	K562	PTBP1
PHKB	ENSG00000102893.11	1976.70860	3075.50560	-0.63770	17.57750	16.25870	HepG2	PCBP1
PHKB	ENSG00000102893.11	1781.73870	3127.18880	-0.81160	16.76110	15.46360	HepG2	PUF60
PHKB	ENSG00000102893.11	4883.18100	3400.80480	0.52180	16.20400	15.26190	HepG2	SRSF1
PHKB	ENSG00000102893.11	1380.37460	2378.09360	-0.78470	17.08950	14.81990	K562	SF3B4
PHKB	ENSG00000102893.11	874.41370	1752.78300	-1.00330	16.66010	14.79800	K562	PRPF8
PHKB	ENSG00000102893.11	1448.80190	2677.14430	-0.88580	16.75600	14.48290	K562	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 101 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PHKB is not available on ENCORE database.

33 RBPs can affect the splicing of PHKB :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.23200	0.00027	included	HepG2	RBM22
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.46200	0.00000	included	HepG2	QKI
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.29700	0.00002	included	HepG2	AKAP1
SE	PHKB	ENSG00000102893.11	chr16	+	47667809	47667892	47644736	47644831	47674945	47675001	0.21800	0.00000	included	K562	AQR
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	-0.31400	0.00001	excluded	HepG2	SRSF7
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.39200	0.00000	included	HepG2	DDX3X
SE	PHKB	ENSG00000102893.11	chr16	+	47497792	47497904	47495205	47495337	47531309	47531399	-0.23100	0.00002	excluded	K562	PUS1
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.37500	0.00000	included	HepG2	NCBP2
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.49600	0.00014	included	HepG2	SFPQ
SE	PHKB	ENSG00000102893.11	chr16	+	47497809	47497904	47495033	47495337	47531309	47531399	0.26800	0.00003	included	HepG2	SRSF1

Showing 1 to 10 of 57 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PHKB

General Information

Functions

Localization

Domains (AlphaFold: PHKB)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PHKB is not avaliable on ENCORE database.

39 proteins are bound to PHKB RNA:

eCLIP assay for PHKB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PHKB is not available on ENCORE database.

87 RBPs can affect the gene expression of PHKB :

The Knockdown/knockout RNA-Seq assay for PHKB is not available on ENCORE database.

33 RBPs can affect the splicing of PHKB :

The Knockdown/knockout RNA-Seq assay for PHKB is not avaliable on ENCORE database.