NXN

General Information

Gene Name       : NXN
Gene ID             : ENSG00000167693.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NXN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NXNENSG00000167693.160.150.330.24ENCSR000AEF
HepG2NXNENSG00000167693.1628.6827.1327.91ENCSR985KAT
K562NXNENSG00000167693.160.080.260.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NXN is not avaliable on ENCORE database.



Proteins bound to RNA
  • NXN RNA is bound by 29 proteins.  







eCLIP assay for NXN is not avaliable on ENCORE database.





29 proteins are bound to NXN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr17722695722772-3'-UTR,5'-UTR,CDS,intron-Distal4.131583.79347HepG2GRWD1
chr17704063704151-3'-UTR,intron-Distal3.472248.63173HepG2PCBP2
chr17722702722787-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.381205.90680HepG2PPIG
chr17704011704121-3'-UTR,intron-Distal,intron-Proximal4.439235.35992HepG2UPF1
chr17729200729269-3'-UTR,CDS,intron-Distal,intron-Proximal3.591934.41267HepG2PPIG
chr17882814882989-5'-UTR,CDS,intron-Distal3.042233.90007HepG2NCBP2
chr17882904882972-5'-UTR,CDS,intron-Distal3.811413.42611HepG2SRSF1
chr17882784882971-5'-UTR,CDS,intron-Distal,intron-Proximal3.7120015.15746HepG2DDX3X
chr17722635722688-CDS,intron-Distal,intron-Proximal3.740927.87148HepG2PRPF8
chr17706863706934-CDS,intron-Distal,intron-Proximal4.985296.69228HepG2PRPF8
chr17881482881532-intron-Distal,intron-Proximal3.139863.10946HepG2SFPQ
chr17823050823094-intron-Distal4.030843.27946HepG2HNRNPM
chr17713238713361-intron-Distal3.679748.35041HepG2HNRNPL
chr17882125882208-intron-Distal6.2368913.60442HepG2DDX59
chr17715673715756-intron-Distal5.7495126.51847HepG2AGGF1
chr17794909795008-intron-Distal4.666085.93727HepG2CSTF2T
chr17853446853494-intron-Distal4.796196.33281HepG2FAM120A
chr17712482712568-intron-Distal3.053554.98353HepG2CSTF2T
chr17715800715920-intron-Distal4.891519.23338HepG2XPO5
chr17851909852010-intron-Distal4.6888112.55463HepG2PRPF4
chr17871709871844-intron-Distal4.289765.95943HepG2HNRNPM
chr17716216716321-intron-Distal4.118969.46623HepG2HNRNPL
chr17795391795440-intron-Distal5.2290013.19288HepG2RBFOX2
chr17795230795264-intron-Distal4.677235.63630HepG2DROSHA
chr17709224709322-intron-Distal3.359025.36249HepG2CSTF2T
chr17709691709756-intron-Distal3.519723.15341HepG2AGGF1
chr17882044882102-intron-Distal3.995603.40087HepG2RBFOX2
chr17794953795019-intron-Distal5.568667.06641HepG2PCBP2
chr17712677712736-intron-Distal3.300634.35304HepG2AGGF1
chr17853161853269-intron-Distal3.238656.34440HepG2STAU2
chr17709317709405-intron-Distal3.302546.67956HepG2FAM120A
chr17781579781735-intron-Distal4.637965.33511HepG2HNRNPK
chr17712508712570-intron-Distal4.537103.56692HepG2AGGF1
chr17849799849934-intron-Distal4.685936.27118HepG2STAU2
chr17852967853086-intron-Distal3.801713.26022HepG2PRPF4
chr17709697709765-intron-Distal3.738105.80161HepG2CSTF2T
chr17853037853106-intron-Distal4.779337.09999HepG2CSTF2T
chr17822897822965-intron-Distal5.062914.31871HepG2HNRNPM
chr17795440795495-intron-Distal5.2787212.92345HepG2RBFOX2
chr17882238882364-intron-Distal5.4928427.15576HepG2DDX59
chr17851886851989-intron-Distal3.692646.93203HepG2GTF2F1
chr17715809715943-intron-Distal4.955376.40009HepG2GTF2F1
chr17853123853262-intron-Distal4.307165.35385HepG2PRPF4
chr17794854794961-intron-Distal7.1617533.71816HepG2DROSHA
chr17856135856199-intron-Distal3.457363.89652HepG2SFPQ
chr17715815715935-intron-Distal6.8994624.13894HepG2AGGF1
chr17781545781638-intron-Distal3.853705.52200HepG2DDX59
chr17710104710165-intron-Distal4.418023.56692HepG2AGGF1
chr17713433713489-intron-Distal4.027906.64740HepG2HNRNPL
chr17843840843862-intron-Distal4.508648.37039HepG2HNRNPM
chr17881958882029-intron-Distal4.062939.47975HepG2DDX59
chr17853795853874-intron-Distal3.958563.19526HepG2CSTF2T
chr17805822805917-intron-Distal4.512584.38204HepG2SFPQ
chr17715677715755-intron-Distal4.177087.46637HepG2XPO5
chr17714273714391-intron-Distal3.942896.17312HepG2PCBP2
chr17853037853115-intron-Distal4.902697.22168HepG2FAM120A
chr17822986823032-intron-Distal3.999813.00241HepG2SFPQ
chr17715803715962-intron-Distal5.1495515.32775HepG2HNRNPL
chr17715662715743-intron-Distal5.117257.57617HepG2GTF2F1
chr17836425836565-intron-Distal4.4048515.00987HepG2QKI
chr17794946795003-intron-Distal3.626263.05512HepG2PRPF4
chr17714982715062-intron-Distal3.212633.04847HepG2CSTF2T
chr17829508829578-intron-Distal3.362283.51682HepG2RBFOX2
chr17852012852074-intron-Distal4.469215.23978HepG2PRPF4
chr17794901795021-intron-Distal5.3713411.28857HepG2DDX6
chr17851832851911-intron-Distal4.432343.82670HepG2SFPQ
chr17882224882286-intron-Distal4.045744.12666HepG2HNRNPK
chr17713545713620-intron-Distal3.136944.54315HepG2HNRNPL
chr17715071715107-intron-Distal4.331083.80418HepG2AGGF1
chr17715937715975-intron-Distal4.808378.36566HepG2AGGF1
chr17843802843840-intron-Distal3.633297.42696HepG2HNRNPM
chr17709322709393-intron-Distal5.052378.46281HepG2CSTF2T
chr17775383775506-intron-Distal5.1840414.89505HepG2PCBP2
chr17882160882212-intron-Distal3.333215.91153HepG2CSTF2T
chr17855972856023-intron-Distal5.0135112.48637HepG2DDX59
chr17852015852073-intron-Distal4.609845.93727HepG2CSTF2T
chr17881939882026-intron-Distal3.046776.52271HepG2NKRF
chr17795067795139-intron-Distal5.202196.77255HepG2DROSHA
chr17855306855368-intron-Distal3.955774.74496HepG2DDX59
chr17881407881452-intron-Distal,intron-Proximal4.184903.97018HepG2HNRNPM
chr17795697795710-intron-Distal4.041987.32957HepG2RBFOX2
chr17851705851769-intron-Distal3.037973.37046HepG2STAU2
chr17714984715043-intron-Distal5.3947510.11307HepG2AGGF1
chr17881889881938-intron-Distal4.717544.33458HepG2XPO5
chr17792875792920-intron-Distal5.476609.21318HepG2PTBP1
chr17882045882125-intron-Distal5.8025122.78701HepG2DDX59
chr17851850852007-intron-Distal3.277768.14615HepG2STAU2
chr17795047795154-intron-Distal7.0160223.43250HepG2RBFOX2
chr17836774836831-intron-Distal4.227653.55064HepG2SFPQ
chr17715625715776-intron-Distal4.9850312.37597HepG2HNRNPL
chr17858205858282-intron-Distal3.225043.06445HepG2EIF3D
chr17709313709382-intron-Distal3.405593.15341HepG2AGGF1
chr17851769851850-intron-Distal3.134893.34225HepG2STAU2
chr17794961795022-intron-Distal5.4765117.12537HepG2DROSHA
chr17715866715974-intron-Distal3.989615.12645HepG2CDC40
chr17710397710489-intron-Distal3.760144.28120HepG2AGGF1
chr17853172853234-intron-Distal3.787955.60571HepG2FAM120A
chr17851902851982-intron-Distal4.8247618.54763HepG2FAM120A
chr17795581795664-intron-Distal4.825336.76412HepG2DROSHA
chr17795349795391-intron-Distal4.3992811.71889HepG2RBFOX2
chr17882046882092-intron-Distal3.649203.21001HepG2XRN2
chr17851699851748-intron-Distal3.753703.39593HepG2PRPF4
chr17856023856067-intron-Distal3.893004.14131HepG2DDX59
chr17709990710038-intron-Distal3.406214.37279HepG2CSTF2T
chr17852006852084-intron-Distal6.3641616.82805HepG2FAM120A
chr17853139853196-intron-Distal4.324164.42691HepG2GTF2F1
chr17855801855851-intron-Distal4.662586.94678HepG2DDX59
chr17716279716342-intron-Distal5.2300519.14249HepG2AGGF1
chr17852283852343-intron-Distal4.282404.61345HepG2FAM120A
chr17853235853273-intron-Distal3.859703.03048HepG2GTF2F1
chr17861205861259-intron-Distal3.970483.79323HepG2STAU2
chr17851908851976-intron-Distal3.136229.77384HepG2CSTF2T
chr17794923795003-intron-Distal5.005086.03756HepG2FAM120A
chr17882137882208-intron-Distal3.956083.31570HepG2HNRNPK
chr17713250713307-intron-Distal4.329589.43262HepG2AGGF1
chr17842463842540-intron-Distal4.063863.30328HepG2SFPQ
chr17793176793268-intron-Distal4.143373.60235HepG2HNRNPM
chr17855963856062-intron-Distal3.786828.07504HepG2HNRNPK
chr17794906795032-intron-Distal6.1809362.48659HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NXN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NXN is not available on ENCORE database.

  • 65 RBPs can affect the levels of NXN.  








The Knockdown/knockout RNA-Seq assay for NXN is not available on ENCORE database.





65 RBPs can affect the gene expression of NXN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NXNENSG00000167693.12674.72890932.36020-0.466603.450802.40210HepG2ABCF1
NXNENSG00000167693.121222.77100706.626000.7910016.8799015.20510HepG2AKAP8L
NXNENSG00000167693.12311.26220490.86130-0.657204.459003.34080HepG2BCLAF1
NXNENSG00000167693.12539.71900698.36850-0.371802.787401.54960HepG2BUD13
NXNENSG00000167693.12445.90570749.64490-0.749508.526907.27810HepG2CALR
NXNENSG00000167693.12401.14660660.01220-0.718403.082702.26820HepG2CIRBP
NXNENSG00000167693.12599.55030827.16090-0.464303.344902.59700HepG2CPSF6
NXNENSG00000167693.12440.19470625.07410-0.505904.590803.28100HepG2YBX3
NXNENSG00000167693.12534.45100348.876300.615204.058902.78380HepG2CSTF2
NXNENSG00000167693.121077.98730837.397800.364304.203303.44200HepG2CELF1
NXNENSG00000167693.12426.15740541.77090-0.346301.884001.31230HepG2DDX21
NXNENSG00000167693.12309.34040530.45810-0.778005.573204.27480HepG2DDX24
NXNENSG00000167693.12575.99650880.31320-0.612005.942704.09300HepG2DDX47
NXNENSG00000167693.12514.66700771.92970-0.584805.041803.70790HepG2DDX5
NXNENSG00000167693.12378.80320672.97230-0.829107.672706.65250HepG2DKC1
NXNENSG00000167693.12340.63510511.81100-0.587404.724503.35630HepG2EIF3G
NXNENSG00000167693.12320.53050505.45130-0.657103.863601.75980HepG2EIF3H
NXNENSG00000167693.12618.42530850.90020-0.460403.267402.38630HepG2EIF4G2
NXNENSG00000167693.12506.22860807.51730-0.673706.898705.26840HepG2ESF1
NXNENSG00000167693.12970.235401224.27600-0.335504.101903.39510HepG2ETF1
NXNENSG00000167693.12967.26750687.258400.493004.803103.70850HepG2EWSR1
NXNENSG00000167693.12384.58600828.56120-1.107305.493804.06820HepG2FTO
NXNENSG00000167693.12383.27080643.74160-0.748107.801706.51650HepG2FUBP3
NXNENSG00000167693.121118.61220740.788500.594504.681603.79720HepG2FXR1
NXNENSG00000167693.12384.16410509.45180-0.407202.217301.31070HepG2GNB2L1
NXNENSG00000167693.12699.00860937.67440-0.423802.637902.01020HepG2GPKOW
NXNENSG00000167693.12452.01750619.65700-0.455102.984602.31680HepG2HNRNPA1
NXNENSG00000167693.12413.11000689.25340-0.738507.050505.98540HepG2HNRNPC
NXNENSG00000167693.12705.10430891.17890-0.337903.412902.62240HepG2HNRNPF
NXNENSG00000167693.12516.24380894.83780-0.793608.290907.26470HepG2HNRNPLL
NXNENSG00000167693.12664.28740877.55230-0.401703.599202.78210HepG2IGF2BP1
NXNENSG00000167693.121074.59530745.117100.528202.567501.95740HepG2MATR3
NXNENSG00000167693.12583.51730912.56790-0.645203.776302.63300HepG2MTPAP
NXNENSG00000167693.12423.59710793.42810-0.905409.987908.63520HepG2NSUN2
NXNENSG00000167693.12545.48860713.76210-0.387903.642202.96620HepG2PCBP1
NXNENSG00000167693.12603.51200791.11380-0.390503.798302.90500HepG2PRPF4
NXNENSG00000167693.12564.21960726.27700-0.364302.944202.38330HepG2PTBP1
NXNENSG00000167693.12530.62270852.20200-0.683507.205306.30060HepG2PUF60
NXNENSG00000167693.12440.32720716.48860-0.702406.709605.82190HepG2PUS1
NXNENSG00000167693.12399.28430786.58140-0.9782015.1335013.83920HepG2QKI
NXNENSG00000167693.121365.124401023.270300.415705.169804.51620HepG2RBM22
NXNENSG00000167693.12484.76430713.87110-0.558405.088604.19970HepG2RBM25
NXNENSG00000167693.12619.46360752.79800-0.281202.115301.56720HepG2RECQL
NXNENSG00000167693.12705.76670495.705500.509604.227303.48260HepG2RPS19
NXNENSG00000167693.12714.07730555.096400.363202.017401.32660HepG2RPS2
NXNENSG00000167693.12868.11570566.643800.615305.182303.69690HepG2RPS5
NXNENSG00000167693.12479.53100609.75280-0.346602.871902.21830HepG2SAFB2
NXNENSG00000167693.12400.77480885.72600-1.1441016.4947014.92710HepG2SF3B1
NXNENSG00000167693.12498.17400756.15270-0.602007.402206.51080HepG2SF3B4
NXNENSG00000167693.12981.804601155.74980-0.235302.258801.79090HepG2SRFBP1
NXNENSG00000167693.12682.75060875.56940-0.358903.743202.95180HepG2SRSF7
NXNENSG00000167693.12532.85740642.10170-0.269101.999101.51540HepG2SRSF9
NXNENSG00000167693.12510.291401003.47090-0.9756021.9770020.83370HepG2SSB
NXNENSG00000167693.121101.11370956.949200.202302.016601.46940HepG2SUCLG1
NXNENSG00000167693.12393.03490709.41060-0.8520012.0165010.97530HepG2TAF15
NXNENSG00000167693.12680.40860872.12870-0.358102.350901.67550HepG2TARDBP
NXNENSG00000167693.12421.89920651.85720-0.627706.303605.04680HepG2TIA1
NXNENSG00000167693.12909.80690671.257900.438605.386704.65060HepG2TRIM56
NXNENSG00000167693.12592.41990805.20180-0.442703.245602.57010HepG2U2AF1
NXNENSG00000167693.121119.61750881.396600.345002.122401.39510HepG2UBE2L3
NXNENSG00000167693.12614.02690326.618100.910608.423207.10180HepG2UCHL5
NXNENSG00000167693.12501.10140654.00740-0.384202.279801.63580HepG2UPF1
NXNENSG00000167693.12448.13270780.71890-0.8009014.0328012.71370HepG2ZC3H8
NXNENSG00000167693.1224.914703.849102.694303.170402.02150K562CNOT7
NXNENSG00000167693.1220.598902.154703.256903.485402.45480K562PSIP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NXN is not available on ENCORE database.






No RBPs affect the alternative splcing events of NXN on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NXN is not avaliable on ENCORE database.