MYRF

General Information

Gene Name : MYRF
Gene ID : ENSG00000124920.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MYRF)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MYRF	ENSG00000124920.13	0.59	0.85	0.72	ENCSR000AEF
HepG2	MYRF	ENSG00000124920.13	37.07	20.58	28.82	ENCSR985KAT
K562	MYRF	ENSG00000124920.13	12.89	9.88	11.39	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MYRF is not avaliable on ENCORE database.

Proteins bound to RNA

MYRF RNA is bound by 33 proteins.

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eCLIP assay for MYRF is not avaliable on ENCORE database.

33 proteins are bound to MYRF RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	61555697	61555768	+	3'-UTR	4.66727	43.43796	K562	PUM2
chr11	61520123	61520259	+	5'-UTR,CDS	4.31863	40.70799	HepG2	DDX3X
chr11	61546552	61546668	+	intron-Distal,intron-Proximal	4.56904	28.95687	HepG2	EFTUD2
chr11	61555676	61555811	+	3'-UTR	4.37069	27.97642	HepG2	DDX55
chr11	61555715	61555912	+	3'-UTR	3.39189	16.59875	K562	UPF1
chr11	61554187	61554285	+	3'-UTR	5.01585	16.56087	HepG2	UPF1
chr11	61543899	61543950	+	CDS,intron-Proximal	3.79700	15.11916	HepG2	PRPF8
chr11	61555778	61555911	+	3'-UTR	4.14205	14.94199	HepG2	DDX6
chr11	61555679	61555783	+	3'-UTR	3.49858	13.31821	HepG2	UPF1
chr11	61555793	61555914	+	3'-UTR	4.91900	13.31534	HepG2	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 172 entries

eCLIP assay for MYRF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MYRF is not available on ENCORE database.
106 RBPs can affect the levels of MYRF.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MYRF is not available on ENCORE database.

106 RBPs can affect the gene expression of MYRF :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MYRF	ENSG00000124920.9	2131.26780	4361.95420	-1.03330	58.92190	57.37870	HepG2	SRFBP1
MYRF	ENSG00000124920.9	1258.53000	2815.56260	-1.16170	50.78710	48.39280	HepG2	PRPF4
MYRF	ENSG00000124920.9	601.64670	1350.25450	-1.16620	32.05830	30.13170	K562	FXR1
MYRF	ENSG00000124920.9	1557.62110	3087.13830	-0.98690	19.30500	17.59580	HepG2	U2AF1
MYRF	ENSG00000124920.9	1750.48980	2868.75390	-0.71270	16.83820	14.92280	HepG2	HNRNPA2B1
MYRF	ENSG00000124920.9	1439.99350	3442.40160	-1.25740	15.64600	13.80000	HepG2	SNRNP70
MYRF	ENSG00000124920.9	4241.18450	3136.60630	0.43520	14.92070	13.77060	HepG2	PUM1
MYRF	ENSG00000124920.9	3010.53960	2129.00150	0.49970	15.05820	13.65990	HepG2	DNAJC2
MYRF	ENSG00000124920.9	730.01350	1312.04950	-0.84580	15.24200	13.33140	K562	SYNCRIP
MYRF	ENSG00000124920.9	295.52580	719.63000	-1.28400	14.05480	12.18750	K562	G3BP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MYRF is not available on ENCORE database.

14 RBPs can affect the splicing of MYRF :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	MYRF	ENSG00000124920.9	chr11	+	61536731	61536793	61537863	61538004	61533429	61533693	61538971	61539222	0.28200	0.00000	0.00086	1included	HepG2	DROSHA
MXE	MYRF	ENSG00000124920.9	chr11	+	61536731	61536786	61537863	61538004	61533429	61533693	61538971	61539222	0.51600	0.00001	0.00218	1included	HepG2	DROSHA
MXE	MYRF	ENSG00000124920.9	chr11	+	61536731	61536793	61537863	61537997	61533429	61533693	61538971	61539222	-0.22600	0.00004	0.01164	2included	HepG2	PRPF4
A3SS	MYRF	ENSG00000124920.9	chr11	+	61553184	61553346			61553271	61553346	61551751	61551857	0.06900	0.00008	0.00958	longer	HepG2	SF3B4
SE	MYRF	ENSG00000124920.9	chr11	+	61537863	61537997			61533429	61533693	61538971	61539222	0.06900	0.00009	0.04446	included	HepG2	DROSHA
SE	MYRF	ENSG00000124920.9	chr11	+	61548183	61548264			61547693	61547762	61548431	61548517	0.32100	0.00014	0.01454	included	HepG2	HNRNPL
MXE	MYRF	ENSG00000124920.9	chr11	+	61536731	61536793	61537863	61537997	61533429	61533693	61538971	61539222	0.13500	0.00034	0.02975	1included	HepG2	NOLC1
SE	MYRF	ENSG00000124920.9	chr11	+	61548183	61548264			61547693	61547762	61548431	61548517	0.25400	0.00040	0.05061	included	HepG2	SSB
A3SS	MYRF	ENSG00000124920.9	chr11	+	61550969	61551072			61550984	61551072	61549044	61549296	0.37000	0.00043	0.00329	longer	K562	AQR
SE	MYRF	ENSG00000124920.9	chr11	+	61548183	61548264			61547693	61547762	61548431	61548517	0.36700	0.00078	0.04193	included	HepG2	PTBP1

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MYRF

General Information

Functions

Localization

Domains (AlphaFold: MYRF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MYRF is not avaliable on ENCORE database.

33 proteins are bound to MYRF RNA:

eCLIP assay for MYRF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MYRF is not available on ENCORE database.

106 RBPs can affect the gene expression of MYRF :

The Knockdown/knockout RNA-Seq assay for MYRF is not available on ENCORE database.

14 RBPs can affect the splicing of MYRF :

The Knockdown/knockout RNA-Seq assay for MYRF is not avaliable on ENCORE database.