MRE11A

General Information

Gene Name : MRE11A
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MRE11A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MRE11A is not avaliable on ENCORE database.

Proteins bound to RNA

MRE11A RNA is bound by 19 proteins.

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eCLIP assay for MRE11A is not avaliable on ENCORE database.

19 proteins are bound to MRE11A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	94180384	94180461	-	CDS,intron-Distal,intron-Proximal	4.61257	21.14515	K562	UCHL5
chr11	94180551	94180605	-	CDS,intron-Distal,intron-Proximal	4.25795	17.21313	K562	UCHL5
chr11	94179036	94179059	-	CDS,intron-Distal,intron-Proximal	4.86711	16.46871	K562	UCHL5
chr11	94195195	94195246	-	intron-Distal	5.91923	15.65517	K562	EXOSC5
chr11	94180384	94180419	-	CDS,intron-Distal,intron-Proximal	3.70549	14.75990	K562	ZNF622
chr11	94178993	94179036	-	CDS,intron-Distal	5.22731	14.65240	K562	UCHL5
chr11	94189441	94189479	-	CDS,intron-Distal,intron-Proximal	4.09266	14.13437	K562	UCHL5
chr11	94209124	94209186	-	intron-Distal	4.92490	12.87349	HepG2	PCBP2
chr11	94199471	94199581	-	intron-Distal	4.42965	12.25105	HepG2	QKI
chr11	94160369	94160445	-	intron-Distal	5.68109	11.99379	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 93 entries

eCLIP assay for MRE11A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MRE11A is not available on ENCORE database.
123 RBPs can affect the levels of MRE11A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MRE11A is not available on ENCORE database.

123 RBPs can affect the gene expression of MRE11A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MRE11A	ENSG00000020922.8	302.51270	772.26930	-1.35210	34.71270	33.33650	HepG2	ZNF622
MRE11A	ENSG00000020922.8	163.89630	603.33460	-1.88020	27.73170	25.97440	HepG2	DDX3X
MRE11A	ENSG00000020922.8	319.40350	798.13270	-1.32120	22.18610	20.57490	K562	HNRNPC
MRE11A	ENSG00000020922.8	323.21720	702.18120	-1.11930	21.95420	20.35770	HepG2	UPF1
MRE11A	ENSG00000020922.8	173.60700	498.23350	-1.52100	17.44150	16.04250	HepG2	EIF2S1
MRE11A	ENSG00000020922.8	436.86130	918.95090	-1.07280	17.28410	15.96700	HepG2	PUF60
MRE11A	ENSG00000020922.8	919.59770	493.84000	0.89690	16.67240	15.71870	HepG2	SRSF1
MRE11A	ENSG00000020922.8	303.14520	602.56960	-0.99110	16.19510	14.98570	HepG2	TRIM56
MRE11A	ENSG00000020922.8	272.14070	546.09830	-1.00480	16.41270	14.95280	HepG2	DNAJC2
MRE11A	ENSG00000020922.8	278.88450	597.24420	-1.09870	15.95520	14.93240	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 141 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MRE11A is not available on ENCORE database.

6 RBPs can affect the splicing of MRE11A :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MRE11A	ENSG00000020922.8	chr11	-	94209454	94209569			94204739	94204925	94211900	94212042	-0.10700	0.00000	0.00000	excluded	K562	AQR
A3SS	MRE11A	ENSG00000020922.8	chr11	-	94192573	94192789			94192573	94192747	94194101	94194235	0.12500	0.00000	0.00000	longer	K562	AQR
MXE	MRE11A	ENSG00000020922.8	chr11	-	94209454	94209569	94211900	94212138	94204739	94204925	94219089	94219250	0.12600	0.00000	0.00000	1included	K562	AQR
SE	MRE11A	ENSG00000020922.8	chr11	-	94212839	94212927			94211900	94212042	94219089	94219250	-0.07700	0.00017	0.00270	excluded	K562	AQR
SE	MRE11A	ENSG00000020922.8	chr11	-	94209454	94209569			94204739	94204925	94211900	94212042	-0.08100	0.00050	0.02024	excluded	K562	UTP18
SE	MRE11A	ENSG00000020922.8	chr11	-	94209454	94209569			94204739	94204925	94211900	94212042	-0.08300	0.00060	0.01822	excluded	K562	RBM15
SE	MRE11A	ENSG00000020922.8	chr11	-	94206481	94206627			94204739	94204925	94209454	94209569	0.12700	0.00074	0.01088	included	HepG2	U2AF2
SE	MRE11A	ENSG00000020922.8	chr11	-	94206466	94206627			94204739	94204925	94209454	94209569	0.07000	0.00351	0.05255	included	K562	HNRNPC
SE	MRE11A	ENSG00000020922.8	chr11	-	94209454	94209569			94204739	94204925	94211900	94212042	-0.05600	0.00439	0.05634	excluded	K562	PUS1
A3SS	MRE11A	ENSG00000020922.8	chr11	-	94192573	94192789			94192573	94192764	94194101	94194235	-0.62100	0.00691	0.03836	shorter	K562	AQR

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MRE11A

General Information

Functions

Localization

Domains (AlphaFold: MRE11A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MRE11A is not avaliable on ENCORE database.

19 proteins are bound to MRE11A RNA:

eCLIP assay for MRE11A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MRE11A is not available on ENCORE database.

123 RBPs can affect the gene expression of MRE11A :

The Knockdown/knockout RNA-Seq assay for MRE11A is not available on ENCORE database.

6 RBPs can affect the splicing of MRE11A :

The Knockdown/knockout RNA-Seq assay for MRE11A is not avaliable on ENCORE database.